Job Description P0ABF1 Confidence 30.28% Date Thu Jan 5 11:15:21 GMT 2012 Rank 27 Aligned Residues 66 % Identity 18% Template c3fpnA_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:geobacillus stearothermophilus uvra interaction PDBTitle: crystal structure of uvra-uvrb interaction domains Resolution 1.80 Å

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		49	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.						.	.	.	.	.	.	.	80	.	.	.	.	.	.							.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.
Predicted Secondary structure																										.	.	.	.	.															.	.	.	.	.	.
Query SS confidence																										.	.	.	.	.															.	.	.	.	.	.
Query Sequence		L	K	V	M	Y	R	L	N	K	A	G	Y	E	A	W	L	V	G	G	G	V	R	D	L	.	.	.	.	.	L	L	G	K	K	P	K	D	F	D	V	T	T	N	.	.	.	.	.	.	A	T	P	E	Q	V	R	K	L	F	R	N	C	R	L	V	G	R	R	F	R	L	A	H	V	M	F	G	P	E
Query Conservation																										.	.	.	.	.															.	.	.	.	.	.
Alig confidence																										.	.	.	.	.															.	.	.	.	.	.																			.	.
Template Conservation																																																																					.	.
Template Sequence		A	K	T	L	E	D	I	R	K	Q	G	Y	V	R	V	R	I	D	R	E	M	R	E	L	T	G	D	I	E	L	E	K	N	K	K	H	S	I	D	V	V	V	D	R	I	I	I	K	D	G	I	A	A	R	L	A	D	S	L	E	T	A	L	K	L	A	D	.	.	G	K	V	V	V	D	V	I	G	E
Template Known Secondary structure											T	T							T	T					T	T	S						T	T	S															T	T																T	T	.	.	T							T	T	S
Template Predicted Secondary structure																																																																					.	.
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.			230	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions