Job Description P0ABF1 Confidence 18.08% Date Thu Jan 5 11:15:21 GMT 2012 Rank 59 Aligned Residues 55 % Identity 15% Template c3d3qB_ PDB info PDB header:transferase Chain: B: PDB Molecule:trna delta(2)-isopentenylpyrophosphate PDBTitle: crystal structure of trna delta(2)-isopentenylpyrophosphate2 transferase (se0981) from staphylococcus epidermidis.3 northeast structural genomics consortium target ser100 Resolution 2.70 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	S	R	E	E	S	E	A	E	Q	A	V	A	R	P	Q	V	T	V	I	P	R	E	Q	H	A	I	S	R	K	D	I	S	E	N	A	L	K	V	M	Y	R	L	N	K	A	G	Y	E	A	W	L	V	G	G	G
Query Conservation
Alig confidence																										.
Template Conservation																										.
Template Sequence		T	A	K	V	T	T	E	E	X	E	G	I	P	H	Y	X	I	D	I	L	P	P	D	A	.	S	F	S	A	Y	E	F	K	K	R	A	E	K	Y	I	K	D	I	T	R	R	G	K	V	P	I	I	A	G	G	T
Template Known Secondary structure		T	T				T	T	T	T	T	T					S	S	S		B		T	T	S	.																					T	T
Template Predicted Secondary structure																										.
Template SS confidence
		51	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.		.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions