 |
Job Description | P0ABF1 | Confidence | 15.98% | Date | Thu Jan 5 11:15:21 GMT 2012 |
Rank | 66 | Aligned Residues | 51 |
% Identity | 25% | Template | c2yxbA_ |
PDB info |
PDB header:isomerase | Chain: A: PDB Molecule:coenzyme b12-dependent mutase; |
PDBTitle: crystal structure of the methylmalonyl-coa mutase alpha-subunit from2 aeropyrum pernix
|
Resolution | 1.80 Å |
|
 |
  |   |
28 | . | 30 | . | . | . | . | |
|
|
|
. | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | |
|
. | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |
|  | . | . | . | . |  |  |
|
|
|
|  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Q | V | T | V | I | P | R | . |
. |
. |
. |
E | Q | H | A | I | S | R | K | D | I | S | E | N | A | L | K | V | M | Y | R | L | N | K | A | G | Y | E | A | W | L | V | G | G | G | . |
. |
V | R | D | L | L | L | G | K | K | P | K | D | F | D | V | T | T |
Query Conservation |   |
  |   |   |   |   |   |   | . | . | . | . |   |   |
|   |
|   |   |   |   |
|   |   |   |
|   |   |
|
|   |   |
|   |   |   |
|   |   |
|
|
|
|
|
|   | . | . |
|
|
|   |
|
|
|   |   |   |   |
|   |
|
|   |
|
Alig confidence |   |
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|
|
|
|   |   |   |   |   |
|   |
|   |   | . | . | . | . | . | . | . |
|   |   |   |
|   |   |   |
|   |   |   |
|   |
|
|   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|   |
Template Sequence |   |
R | Y | K | V | L | V | A | K | X | G | L | D | G | H | D | R | . |
. |
. |
. |
. |
. |
. |
G | A | K | V | V | A | R | A | L | R | D | A | G | F | E | V | V | Y | T | G | L | R | Q | T | P | E | Q | V | A | X | A | A | V | Q | E | D | V | D | V | I | G |
Template Known Secondary structure |   |
S |
|  |  |  |  |  |  |  | S | S | S | S |
|
|  | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |
|
|
| S | B |
|
|  |  |  |  |  |  |  |  |  |  | T | T |
| S |  |  |  |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | |
|
|
|
|
|
|
. | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|