Job Description P0ABF1 Confidence 100.00% Date Thu Jan 5 11:15:21 GMT 2012 Rank 5 Aligned Residues 318 % Identity 26% Template c1ou5A_ PDB info PDB header:translation, transferase Chain: A: PDB Molecule:trna cca-adding enzyme; PDBTitle: crystal structure of human cca-adding enzyme Resolution 3.40 Å

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		41	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.						100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
Predicted Secondary structure																																																													.	.	.	.	.
Query SS confidence																																																													.	.	.	.	.
Query Sequence		R	K	D	I	S	E	N	A	L	K	V	M	Y	R	L	N	K	A	G	Y	E	A	W	L	V	G	G	G	V	R	D	L	L	L	G	K	K	P	K	D	F	D	V	T	T	N	A	T	P	E	Q	V	R	K	L	F	R	N	C	.	.	.	.	.	R	L	V	G	R	R	F	R	L	A	H	V	M	F	G	P
Query Conservation																																																													.	.	.	.	.
Alig confidence																																																													.	.	.	.	.
Template Conservation
Template Sequence		Q	S	L	F	T	E	G	L	K	S	L	T	E	L	F	V	K	E	N	H	E	L	R	I	A	G	G	A	V	R	D	L	L	N	G	V	K	P	Q	D	I	D	F	A	T	T	A	T	P	T	Q	M	K	E	M	F	Q	S	A	G	I	R	M	I	N	N	R	G	E	K	H	G	T	I	T	A	R	L	H	E
Template Known Secondary structure					S		T	T											T	T							S	T	T	T						T	S			S	S						S	S										T	T	T	T			B						T	T								T	T	T
Template Predicted Secondary structure
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	I	I	E	V	A	T	F	R	G	H	H	E	G	N	V	S	D	R	T	T	S	Q	R	G	Q	N	G	M	L	L	R	D	N	I	F	G	S	I	E	E	D	A	Q	R	R	D	F	T	I	N	S	L	Y	Y	S	V	A	D	F	T	V	R	D	Y	V	G	G	M	K	D	L	K	D	G	V	I	R	L	I
Query Conservation
Alig confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.
Template Conservation															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.
Template Sequence		E	N	F	E	I	T	T	L	R	I	F	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	W	Q	K	D	A	E	R	R	D	L	T	I	N	S	M	F	L	G	F	.	D	G	T	L	F	D	Y	F	N	G	Y	E	D	L	K	N	K	K	V	R	F	V
Template Known Secondary structure		T									S	S	S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S	S			G	G	G	S	S	B	G	G	G	S					S	.	S		B				S	S	S					T	T	T	T				B	S
Template Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.																									.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.		.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
		196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220				.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.
Predicted Secondary structure																											.	.	.
Query SS confidence																											.	.	.
Query Sequence		G	N	P	E	T	R	Y	R	E	D	P	V	R	M	L	R	A	V	R	F	A	A	K	L	G	.	.	.	M	R	I	S	P	E	T	A	E	P	I	P	R	L	A	T	L	L	N	D	I	P	P	A	R	L	F	E	E	S	L	K	L	L	Q	A	G	Y	G	Y	E	T	Y	K	L	L	C	E	Y	H	L	F
Query Conservation																											.	.	.
Alig confidence																											.	.	.
Template Conservation
Template Sequence		G	H	A	K	Q	R	I	Q	E	D	Y	L	R	I	L	R	Y	F	R	F	Y	G	R	I	V	D	K	P	G	D	H	D	P	E	T	L	E	A	I	A	E	N	A	K	G	L	A	G	I	S	G	E	R	I	W	V	E	L	K	K	I	L	V	G	N	H	V	N	H	L	I	H	L	I	Y	D	L	D	V	A
Template Known Secondary structure		S	T	T	T	T	T	S	S	S		T	T												S		S	S	S	S													S		T	T	G	G	G	S		S												T	S	T	T											T	T		G
Template Predicted Secondary structure
Template SS confidence
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
		273	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	P	L	F	P	T	I	T	R	Y	F	T	E	N	G	D	S	P	M	E	R	I	I	E	Q	V	L	K	N	T	D	T	R	I	H	N	D	M	R	V	N	P	A	F	L	F	A	A	M	F	W	Y	P	L	L	E	T	A	Q	K	I	A	Q	E	S	G	L	T	Y	H	D	A	F	A	L	A	M	N	D	V
Query Conservation
Alig confidence													.	.	.	.	.	.	.	.	.	.	.	.	.																.											.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation													.	.	.	.	.	.	.	.	.	.	.	.	.																.											.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	Y	I	G	L	P	A	N	A	S	L	.	.	.	.	.	.	.	.	.	.	.	.	.	E	E	F	D	K	V	S	K	N	V	D	G	F	S	P	.	K	P	V	T	L	L	A	S	L	F	.	K	V	Q	D	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		G	G	G	T					S			.	.	.	.	.	.	.	.	.	.	.	.	.											T	T	S			.							G	G	G		.		S	T	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.	.																.											.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		236	.	.	.	240	.	.	.	.	.	.														.	.	.	250	.	.	.	.	.	.	.	.	.	260	.		.	.	.	.	.	.	.	.	270	.		.	.	.	.	.
		353	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.							.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.
Predicted Secondary structure																																					.	.	.	.	.	.
Query SS confidence																																					.	.	.	.	.	.
Query Sequence		L	D	E	A	C	R	S	L	A	I	P	K	R	L	T	T	L	T	R	D	I	W	Q	L	Q	L	R	M	S	R	R	Q	G	K	R	.	.	.	.	.	.	A	W	K	L	L	E	H	P	K	F	R	A	A	Y	D	L	L	A	L	R	A	E	V	E	R	N	A	E	L	Q	R	L	V	K	W
Query Conservation																																					.	.	.	.	.	.
Alig confidence																																					.	.	.	.	.	.
Template Conservation
Template Sequence		V	T	K	L	D	L	R	L	K	I	A	K	E	E	K	N	L	G	L	F	I	V	K	N	R	K	D	L	I	K	A	T	D	S	S	D	P	L	K	P	Y	Q	D	F	I	I	D	S	R	E	P	D	A	T	T	R	V	C	E	L	L	K	Y	Q	G	E	H	C	L	L	K	E	M	Q	Q	W
Template Known Secondary structure		T											T	T									T	T	T	T	T	T	T	S				S	S	S	S	T	T												S	T	T													T									T	T
Template Predicted Secondary structure
Template SS confidence
		277	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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