|   |
328 | . | 330 | . | . | . | . | . | . | . | . | . | 340 | |
|
|
|
|
|
|
. | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 |
Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |
|  |  | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | S | S | G | F | I | C | G | L | Y | T | G | G | . |
. |
. |
. |
. |
. |
. |
T | L | A | A | E | A | A | G | L | L | A | G | H | L | G | V | E | A | D | D | T | H | Q | H | G | M | M | L | D | A | D | S | H | Q | I | I | D | L | G | D | D | F | Y | T | V | G | R | P | H | P | M | I | D | P | T | L | R | N | Q | L |
Query Conservation |   |
  |   |
|   |   |
|   |   |
|
|   |
|
| . | . | . | . | . | . | . |   |
|
|   |
|
|   |
|   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|
|   |   |   |
|   |   |
|
|
|
|
|
|
|
|
|   |   |
|   |
|
|
|   |   |
|
|
|
|   |
|   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|   |
|
|
|
|
|
|   |
|
|
|   |   |   |
|   |
|
|   |   |   |   |   |
|
|   |
|
|   |
|   |   |   |
|   |   |   |
|   |   |   |
|
|   |   |   |   |   |   |
|
|
|
|
|   |   |   |
| . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |
Template Sequence |   |
P | R | G | N | K | V | A | I | X | T | N | A | G | G | P | G | V | L | T | A | D | E | L | D | K | R | G | L | K | L | A | T | L | E | E | K | T | I | E | E | L | R | S | F | L | P | P | X | A | A | V | K | N | P | V | D | X | I | A | S | A | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
R | G | E | D | Y | Y | R | T |
Template Known Secondary structure |   |
|
| S | S |  |  |  |  |  |  | S |
|  |  |  |  |  |  |  |  |  |  |  |  | T | T | T |
|  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  | S |
| T | T |
|  |  | S | S |  |  |  |
|
| T | T |
| . | . | . | . | . | . | . | . | . | . | . |
|  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . |
|  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
291 | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | |
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . |
  |
  |   |
401 | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480 |
Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | A | D | L | G | A | K | P | Q | V | R | V | L | L | L | D | V | V | I | G | F | G | A | T | A | D | P | A | A | S | L | V | S | A | W | Q | K | A | C | A | A | R | L | D | N | Q | P | L | Y | A | I | A | T | V | T | G | T | E | R | D | P | Q | C | R | S | Q | Q | I | A | T | L | E | D | A | G | I | A | V | V | S |
Query Conservation |   |
|   |   |   |   |
|
|
|   |
|
|
|
|
|
|   |   |
|
|
|   |   |
|   |   |
|
|
|   |   |
|   |   |
|
|   |   |
|   |   |
|   |   |   |   |   |   |   |
|
|
|
|   |   |   |
|
|   |   |
|
|
|   |   |   |   |   |
|
|   |
|   |
|
|
|
|
|
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |   |   |
|   |   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . | . |   |   |   |
|
|
|
|   |   |   |   |   |   |   |   | . | . | . | . |   |   |   |   |   |   |   |
|   |   |   |
|
|
|   |
|   |
Template Sequence |   |
A | K | L | L | L | Q | D | P | N | V | D | X | L | I | A | I | C | V | V | P | T | F | A | G | X | T | L | T | E | H | A | E | G | I | I | R | A | V | K | E | V | . |
. |
. |
N | N | E | K | P | V | L | A | X | F | X | A | G | Y | V | . |
. |
. |
. |
S | E | K | A | K | E | L | L | E | K | N | G | I | P | T | Y | E |
Template Known Secondary structure |   |
 |  |  |  |  |  | S | T | T |
| S |  |  |  |  |  |  |  |
|
|
| S | T | T |
|
| S | S |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |
|
|
|
|
|  |  |  |  |  |  |
| T | T | T | . | . | . | . | T |  |  |  |  |  |  |  |  | T | T | T |
|
|  |  | S |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| . | . | . |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
| . | . | . | . |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | |
|
|
. | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | |
|
|
|
. | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . |
  |
  |   |
481 | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | L | P | E | A | T | L | L | A | A | A | L | I | H | P | L | S | P | A | A |
Query Conservation |   |
|
|   |
|
|
|
|
|
|
|
|
|   |
|   |   |   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |
|   |   |
|
|   |   |
|   |   |
|   |
|   |   |   |
Template Sequence |   |
R | P | E | D | V | A | S | A | A | Y | A | L | V | E | Q | A | K | N | V | G |
Template Known Secondary structure |   |
S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
433 | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . |
  |