 |
Job Description | Q47208 | Confidence | 41.61% | Date | Thu Jan 5 12:36:39 GMT 2012 |
Rank | 254 | Aligned Residues | 66 |
% Identity | 18% | Template | d1q6za2 |
SCOP info | Thiamin diphosphate-binding fold (THDP-binding)
| Thiamin diphosphate-binding fold (THDP-binding)
| Pyruvate oxidase and decarboxylase Pyr module
|
Resolution | 1.00 |
|
 |
  |   |
204 | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
T | G | I | Q | E | L | C | S | Q | I | A | L | A | G | E | G | I | T | H | A | I | G | L | G | G | R | D | L | S | R | E | V | G | G | I | S | A | L | T | A | L | E | M | L | S | A | D | E | K | S | E | V | L | A | F | V | S | K | P | P | A | E | A | V | R | L | K | I | V | N | A | M | K | A | T | G | K | P | T | V |
Query Conservation |   |
  |
|   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |
|   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |
|   |   |
|
|   |
|   |   |
|   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |   |
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |   |   |
|   |
|   |
|   |   |   | . | . |
|
|   |   |
|
|
|   | . | . | . | . | . | . | . | . | . |
|
|   |   |   |   |   |
|   |   |   |
|   |   |   | . | . | . | . | . |
|   |   |
|   |   |   |   |
|   |   |
|   |   |   |
|   |
|
|
|
|   |
|
|   |   |   |
|
Template Sequence |   |
S | V | H | G | T | T | Y | E | L | L | R | R | Q | . |
. |
G | I | D | T | V | F | G | N | . |
. |
. |
. |
. |
. |
. |
. |
. |
P | G | S | N | A | L | P | F | L | K | D | F | P | E | D | . |
. |
. |
. |
. |
F | R | Y | I | L | A | L | Q | E | A | C | V | V | G | I | A | D | G | Y | A | Q | A | S | R | K | P | A | F |
Template Known Secondary structure |   |
B |  |  |  |  |  |  |  |  |  |  |  | T | . | . | T |
|
|  |  |  |  |
| . | . | . | . | . | . | . | . | . |
|
| G | G | G |  |  |  |  | T | T |
|
| T | T | . | . | . | . | . |
|  |  |  |  |
| S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | S |
|  |  |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |
| . | . |
|
|
|  |  |  |  |
| . | . | . | . | . | . | . | . | . |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
| . | . | . | . | . |
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
3 | . | . | . | . | . | . | 10 | . | . | . | . | . | |
|
. | . | . | . | 20 | . | . | . | |
|
|
|
|
|
|
|
|
. | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | |
|
|
|
|
. | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . |
  |
  |   |
284 | . |
Predicted Secondary structure |   |
 |  |
Query SS confidence |   |
|
|
Query Sequence |   |
A | L |
Query Conservation |   |
|
|
Alig confidence |   |
|
|
Template Conservation |   |
  |   |
Template Sequence |   |
I | N |
Template Known Secondary structure |   |
 |  |
Template Predicted Secondary structure |   |
 |  |
Template SS confidence |   |
|
|
  |   |
67 | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|