 |
Job Description | Q47208 | Confidence | 97.23% | Date | Thu Jan 5 12:36:39 GMT 2012 |
Rank | 32 | Aligned Residues | 68 |
% Identity | 15% | Template | c3oqbF_ |
PDB info |
PDB header:oxidoreductase | Chain: F: PDB Molecule:oxidoreductase; |
PDBTitle: crystal structure of putative oxidoreductase from bradyrhizobium2 japonicum usda 110
|
Resolution | 2.60 Å |
|
 |
  |   |
101 | . | . | |
. | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | |
|
|
. | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . |
Predicted Secondary structure |   |
|
|
| . |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  | . | . | . |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
Query SS confidence |   |
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | L | T | . |
Q | V | R | R | W | D | S | A | C | Q | K | L | P | D | A | N | L | A | L | I | S | V | A | G | E | Y | A | A | E | L | A | N | Q | A | L | D | R | N | L | N | V | M | M | . |
. |
. |
F | S | D | N | V | T | L | E | D | E | I | Q | L | K | T | R | A | R | E | K | G | L | L | V | M |
Query Conservation |   |
  |   |   | . |   |   |   |   |   |   |   |
|
|   |   |   |
|   |
|
|
|
|
|
|   |
|
|   |   |   |
|   |   |   |   |   |
|
|   |   |
|
|
|   |   |   |
| . | . | . |   |
|
|   |
|   |   |   |
|   |   |   |
|   |   |   |
|
|   |   |
|   |
|
|
|
Alig confidence |   |
|
|
| . |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |   |   |   |
|   |   |   |
|
|   |   | . |   |   |
|
|
|
|   |
|   |
|
|   |   |   |
|   |   |   |   |   |   |
|
|   |
|
|
|
|
|
|   |
|
|
|
|
| . | . |   |
|   |   |
|
|   |   |
|   |   |
|
|   |   |   |
|   |   |   |   |
Template Sequence |   |
N | I | A | R | W | T | T | D | L | D | A | A | L | A | D | . |
K | N | D | T | X | F | F | D | A | A | T | T | Q | A | R | P | G | L | L | T | Q | A | I | N | A | G | K | H | V | Y | C | E | K | P | I | A | . |
. |
T | N | F | E | E | A | L | E | V | V | K | L | A | N | S | K | G | V | K | H | G |
Template Known Secondary structure |   |
T |
|
|  |  |
| S |
|  |  |  |  |  |  |
| . | T | T |
|
|  |  |  |  |
| S |
| T | T | T |  |  |  |  |  |  |  |  |  | T | T | T |
|  |  |  |  |
| S |
| S |
| . | . | S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|
|  |  |
Template Predicted Secondary structure |   |
|
|
|  |  |  |
|
|  |  |  |  |  |
|
| . |
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
| . | . |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
67 | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | |
. | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | |
|
. | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|