 |
Job Description | Q47208 | Confidence | 20.60% | Date | Thu Jan 5 12:36:39 GMT 2012 |
Rank | 352 | Aligned Residues | 63 |
% Identity | 17% | Template | c3n6rK_ |
PDB info |
PDB header:ligase | Chain: K: PDB Molecule:propionyl-coa carboxylase, alpha subunit; |
PDBTitle: crystal structure of the holoenzyme of propionyl-coa carboxylase (pcc)
|
Resolution | 3.20 Å |
|
 |
  |   |
465 | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . | . | . | . | . | . | . | . | . | 510 | . | . | . | . | . | . | . | . | . | 520 | . | . | . | . | . | . | . | . | . | 530 | . | . | . | . | . | . | . | . | |
|
. | 540 | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
|
|
|
| . | . |
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
Query Sequence |   |
S | Q | Q | I | A | T | L | E | D | A | G | I | A | V | V | S | S | L | P | E | A | T | L | L | A | A | A | L | I | H | P | L | S | P | A | A | Q | Q | H | T | P | S | L | L | E | N | V | A | V | I | N | I | G | L | R | S | F | A | L | E | L | Q | S | A | S | K | P | V | V | H | Y | Q | W | S | . |
. |
P | V | A | G |
Query Conservation |   |
  |   |   |
|
|   |
|   |
|
|
|
|
|
|
|   |
|
|   |
|
|
|
|
|
|
|
|
|   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |
|   |   |
|
|   |   |   |
|   |   |   |   |
|   |
|   |   |   |
|   |
|
|
|   |   |   |   |
| . | . |
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
Template Conservation |   |
  |   |   |
|   |   |   |   |   |   |
|
|   |   |
|
|
|   |   |
|
|
|   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|   |   |   |
|   |   |   |   |   |   |
|
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
S | K | F | A | E | A | L | E | A | E | G | V | I | F | V | G | P | P | K | G | A | I | E | A | M | G | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
D | K | I | T | S | K | K | I | A | Q | E | A | N | V | S | T | V | P | G | Y | M | G | L | I | E | D | A | D |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  | T | T | T |
|
|
| S | S | S |
|  |  |  |  |  |  | T | T | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | S |  |  |  |  |  |  |  |  |  | T | T | T |
|
|
|
|
|  |  |  |  |
|
|
| S |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
|
|
|  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . |
  |
  |   |
543 | . | . | . | . | . | . | 550 | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | N | K | K | L | A | R | L | L | E | R |
Query Conservation |   |
  |   |   |   |   |
|   |   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |   |
|   |   |
|
|   |
Template Sequence |   |
E | A | V | K | I | S | N | Q | I | G | Y |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |
| S |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
  |   |
204 | . | . | . | . | . | 210 | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|