Job Description Q47208 Confidence 71.68% Date Thu Jan 5 12:36:39 GMT 2012 Rank 162 Aligned Residues 110 % Identity 15% Template c3n0lA_ PDB info PDB header:transferase Chain: A: PDB Molecule:serine hydroxymethyltransferase; PDBTitle: crystal structure of serine hydroxymethyltransferase from2 campylobacter jejuni Resolution 1.80 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.			.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure																															.	.
Query SS confidence																															.	.
Query Sequence		G	C	F	Q	D	S	V	S	L	M	I	I	S	R	K	L	S	E	S	E	N	V	D	D	V	S	V	M	M	.	.	G	T	P	A	N	K	A	L	L	D	T	T	G	F	W	H	D	D	F	N	N	A	T	P	N	D	I	C	V	A	I	R	S	E	A	A	D	A	G	I	A	Q	A	I	M	Q	Q	L	E
Query Conservation																															.	.
Alig confidence										.																					.	.													.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation										.																																			.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		C	E	F	V	D	E	I	E	.	T	L	A	I	E	R	C	K	K	L	F	N	C	K	F	A	N	V	Q	P	N	S	G	S	Q	A	N	Q	G	V	Y	A	A	L	.	.	.	.	.	.	.	.	.	I	N	P	G	D	K	I	L	G	X	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure										.												T		S							S	S													.	.	.	.	.	.	.	.	.	S		T	T								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure										.																																			.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		63	.	.	.	.	.	.	70		.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.										.	.	.	.	.	110	.	.	.	.	.
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.		.	.	.	.			.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure																																																											.					.	.
Query SS confidence																																																											.					.	.
Query Sequence		E	A	L	K	Q	L	A	Q	G	S	G	S	S	Q	A	L	T	Q	V	R	R	W	D	S	A	C	Q	K	L	P	D	A	N	L	A	L	I	S	V	A	G	E	Y	A	A	E	L	A	N	Q	A	L	D	R	N	L	N	.	V	M	M	F	.	.	S	D	N	V	T	L	E	D	E	I	Q	L	K	T	R	A
Query Conservation																																																											.					.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.														.					.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	K	X	Y	E	S	C	F	Y	G	V	E	L	D	G	R	I	D	.	.	.	.	.	.	.	.	.	.	.	Y	E	K	V	R	E	I	A	K	K	E	K	P	K	L	I	V	C	G	A	S	A	Y	A	R	V	I	D	F	A	K	F	R	E	I	A
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				S									T	T	S	S			.	.	.	.	.	.	.	.	.	.	.														S							S	S			S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																	116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.												.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
		164	.	.	.	.	.	170	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	E	K	G	L	L	V	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	E	I	G	A	Y	L	F
Template Known Secondary structure					T
Template Predicted Secondary structure
Template SS confidence
		186	.	.	.	190	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions