 |
Job Description | Q47208 | Confidence | 65.46% | Date | Thu Jan 5 12:36:39 GMT 2012 |
Rank | 183 | Aligned Residues | 49 |
% Identity | 22% | Template | c3hrxD_ |
PDB info |
PDB header:lyase | Chain: D: PDB Molecule:probable enoyl-coa hydratase; |
PDBTitle: crystal structure of phenylacetic acid degradation protein paag
|
Resolution | 1.85 Å |
|
 |
  |   |
240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | |
|
|
|
|
270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | L | T | A | L | E | M | L | S | A | D | E | K | S | E | V | L | A | F | V | S | K | P | P | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
A | E | A | V | R | L | . |
. |
. |
. |
. |
K | I | V | N | A | M | K | A | T | G | K | P | T | V | A | L | F | L | G |
Query Conservation |   |
  |   |
|   |
|   |   |
|   |   |
|
|   |
|   |   |
|   |
|   |   |
|   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   | . | . | . | . | . |   |   |   |   |
|
|   |   |   |   |
|
|
|
|
|
|
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |
|   |   |   |   |   |
|   |   |   |   |   |
|
|
|   |
|   |
|   |   |
|   |   |
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |
|   |
|
|
|
|   |
|
Template Sequence |   |
L | Y | A | A | L | K | E | G | E | E | D | R | E | V | R | A | L | L | L | T | G | A | G | R | A | F | S | A | G | Q | D | L | T | E | F | G | D | R | K | P | D | Y | E | A | H | L | R | R | Y | N | R | V | V | E | A | L | S | G | L | E | K | P | L | V | V | A | V | N | G |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
| T | T |
|
|  |  |  |  |  |  | S | T | T |
| S | B |
|
| B |
| T | T | T | T | T | T | S |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| S | S |
|  |  |  |  |  |
| S |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
32 | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|