Job Description Q47208 Confidence 28.59% Date Thu Jan 5 12:36:39 GMT 2012 Rank 295 Aligned Residues 104 % Identity 14% Template c3f6tA_ PDB info PDB header:transferase Chain: A: PDB Molecule:aspartate aminotransferase; PDBTitle: crystal structure of aspartate aminotransferase (e.c. 2.6.1.1)2 (yp_194538.1) from lactobacillus acidophilus ncfm at 2.15 a3 resolution Resolution 2.15 Å

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		59	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.				.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.							.
Predicted Secondary structure																																			.	.	.																																						.	.	.	.	.	.
Query SS confidence																																			.	.	.																																						.	.	.	.	.	.
Query Sequence		A	T	P	N	D	I	C	V	A	I	R	S	E	A	A	D	A	G	I	A	Q	A	I	M	Q	Q	L	E	E	A	L	K	Q	.	.	.	L	A	Q	G	S	G	S	S	Q	A	L	T	Q	V	R	R	W	D	S	A	C	Q	K	L	P	D	A	N	L	A	L	I	S	V	A	G	E	.	.	.	.	.	.	Y
Query Conservation																																			.	.	.																																						.	.	.	.	.	.
Alig confidence												.	.	.	.	.	.	.	.																.	.	.																									.													.	.	.	.	.	.
Template Conservation												.	.	.	.	.	.	.	.																																											.
Template Sequence		A	E	Q	T	D	L	F	P	T	E	.	.	.	.	.	.	.	.	G	G	T	A	A	I	V	Y	A	F	H	S	L	A	E	N	H	L	L	K	K	G	D	K	I	A	I	N	E	P	I	F	T	P	Y	L	R	I	P	E	L	K	.	D	Y	E	L	V	E	V	D	L	H	S	Y	E	K	N	D	W	E	I
Template Known Secondary structure		G	G	G								.	.	.	.	.	.	.	.																T	T	S	S		T	T							S	S							T	S	G	G	G	G	.	G	S											T	T	T	T	S
Template Predicted Secondary structure												.	.	.	.	.	.	.	.																																											.
Template SS confidence
		161	.	.	.	.	.	.	.	.	170									.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.		.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150								.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.		.	.	.	170	.
Predicted Secondary structure																							.	.	.	.	.	.	.																	.
Query SS confidence																							.	.	.	.	.	.	.																	.
Query Sequence		A	A	E	L	A	N	Q	A	L	D	R	N	L	N	V	M	M	F	S	D	N	.	.	.	.	.	.	.	V	T	L	E	D	E	I	Q	L	K	T	R	A	R	E	K	.	G	L	L	V	M
Query Conservation																							.	.	.	.	.	.	.																	.
Alig confidence																							.	.	.	.	.	.	.																	.
Template Conservation
Template Sequence		E	P	N	E	I	E	K	L	K	D	P	S	I	K	A	L	I	V	V	N	P	T	N	P	T	S	K	E	F	D	T	N	A	L	N	A	I	K	Q	A	V	E	K	N	P	K	L	X	I	I
Template Known Secondary structure										S		T	T								S	S		T	T	T		B																		T	T
Template Predicted Secondary structure
Template SS confidence
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions