 |
Job Description | Q47208 | Confidence | 57.91% | Date | Thu Jan 5 12:36:39 GMT 2012 |
Rank | 211 | Aligned Residues | 63 |
% Identity | 16% | Template | c2yv3B_ |
PDB info |
PDB header:oxidoreductase | Chain: B: PDB Molecule:aspartate-semialdehyde dehydrogenase; |
PDBTitle: crystal structure of aspartate semialdehyde dehydrogenase from thermus2 thermophilus hb8
|
Resolution | 2.70 Å |
|
 |
  |   |
113 | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | |
|
|
|
|
. | . | 160 | . | . | . | . | . | . | . | . | |
. | 170 | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |
|
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |  |  |
|
|
| . |  |  |  |
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
Query Sequence |   |
Q | K | L | P | D | A | N | L | A | L | I | S | V | A | G | E | Y | A | A | E | L | A | N | Q | A | L | D | R | N | L | N | V | M | M | F | S | D | N | V | T | L | E | D | E | I | . |
. |
. |
. |
. |
Q | L | K | T | R | A | R | E | K | G | L | . |
L | V | M | G | P | D | C |
Query Conservation |   |
  |   |   |
|   |
|
|
|
|
|
|   |
|
|   |   |   |
|   |   |   |   |   |
|
|   |   |
|
|
|   |   |   |
|   |
|
|   |
|   |   |   |
|   |   | . | . | . | . | . |   |
|   |   |   |
|
|   |   |
|   | . |
|
|
|
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |
|
|
|
|   |
|   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|
|
|
|   |   |   |
|   |   |   |   |   |   |   |   |   |
|
|
|
|   |   |   |
|   |   |   |   |   |   |
|
|   |
|
|
|
Template Sequence |   |
E | G | P | L | P | V | D | L | V | L | A | S | A | G | G | G | I | S | R | A | K | A | L | V | W | A | E | G | G | A | L | V | V | D | N | S | S | A | W | R | Y | E | P | W | V | P | L | V | V | P | E | V | N | R | E | K | I | F | Q | H | R | G | I | I | A | N | P | N | C |
Template Known Secondary structure |   |
S | S |
|
| S |
| S |  |  |  |  |
| S |
| S |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |
| S | T | T | T | T | T |
| T | T | S |
| B |
|
|  |  |  |  | G | G | G | G | G | G |
| S | S |  |  |  |
|
|
|  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |
|
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
57 | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|