Job Description Q47208 Confidence 26.24% Date Thu Jan 5 12:36:39 GMT 2012 Rank 304 Aligned Residues 94 % Identity 18% Template c1fx0B_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:atp synthase beta chain; PDBTitle: crystal structure of the chloroplast f1-atpase from spinach Resolution 3.20 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.					.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
Predicted Secondary structure																																	.	.	.	.																																						.	.	.	.	.	.	.	.
Query SS confidence																																	.	.	.	.																																						.	.	.	.	.	.	.	.
Query Sequence		A	F	A	N	V	M	P	E	G	N	I	G	V	I	G	A	S	G	T	G	I	Q	E	L	C	S	Q	I	A	L	A	.	.	.	.	G	E	G	I	T	H	A	I	G	L	G	G	R	D	L	S	R	E	V	G	G	I	S	A	L	T	A	L	E	M	L	S	A	D	E	K	S	.	.	.	.	.	.	.	.
Query Conservation																																	.	.	.	.																																						.	.	.	.	.	.	.	.
Alig confidence																																	.	.	.	.														.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.
Template Conservation																																																		.	.	.	.	.	.	.
Template Sequence		L	L	A	P	Y	R	R	G	G	K	I	G	L	F	G	G	A	G	V	G	K	T	V	L	I	M	E	L	I	N	N	I	A	K	A	H	G	G	V	S	V	F	G	G	V	G	E	R	.	.	.	.	.	.	.	T	R	E	G	N	D	L	Y	M	E	M	K	E	S	G	V	I	N	E	Q	N	I	A	E	S
Template Known Secondary structure				S				T	T									S	S	S	S												T	T	T	T		S	S								S			.	.	.	.	.	.	.	S													T	T	S	S		S	S	T	T
Template Predicted Secondary structure																																																		.	.	.	.	.	.	.
Template SS confidence
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.								.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
		254	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270									.	.	.	.	.	.	.		.	.	280	.	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.	.	.	.	.								.
Query SS confidence																			.	.	.	.	.	.	.	.								.
Query Sequence		E	V	L	A	F	V	S	K	P	P	A	E	A	V	R	L	K	.	.	.	.	.	.	.	.	I	V	N	A	M	K	A	.	T	G	K	P	T	V	A	L	F
Query Conservation																			.	.	.	.	.	.	.	.								.
Alig confidence																			.	.	.	.	.	.	.	.								.
Template Conservation
Template Sequence		K	V	A	L	V	Y	G	Q	M	N	E	P	P	G	A	R	M	R	V	G	L	T	A	L	T	M	A	E	Y	F	R	D	V	N	E	Q	D	V	L	L	F	I
Template Known Secondary structure										T	T	S						T	T								T					T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions