 |
Job Description | Q47208 | Confidence | 79.25% | Date | Thu Jan 5 12:36:39 GMT 2012 |
Rank | 140 | Aligned Residues | 82 |
% Identity | 10% | Template | c1ebuA_ |
PDB info |
PDB header:oxidoreductase | Chain: A: PDB Molecule:homoserine dehydrogenase; |
PDBTitle: homoserine dehydrogenase complex with nad analogue and l-2 homoserine
|
Resolution | 2.60 Å |
|
 |
  |   |
98 | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | |
|
|
. | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
| . | . | . |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | S | Q | A | L | T | Q | V | R | R | W | D | S | A | C | Q | K | L | P | D | A | N | L | A | L | I | S | V | A | G | E | Y | A | A | E | L | A | N | Q | A | L | D | R | N | L | N | V | M | M | F | S | D | N | . |
. |
. |
V | T | L | E | D | E | I | Q | L | K | T | R | A | R | E | K | G | L | L | V | M | G | P | D |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |
|   |
|
|
|
|
|
|   |
|
|   |   |   |
|   |   |   |   |   |
|
|   |   |
|
|
|   |   |   |
|   |
|
|   | . | . | . |
|   |   |   |
|   |   |   |
|   |   |   |
|
|   |   |
|   |
|
|
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |   |   |
|
|
|
|
|   |   |
|   |   |   |   |
|   |   |   |   |   |   |
|
|
|   |
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |   |   |
|   |   |   |
|   |   |   |
|   |   |   |
|   |
|   |   |
|
|
|
Template Sequence |   |
S | T | T | K | T | L | P | L | D | D | L | I | A | H | L | K | T | S | P | K | P | V | I | L | V | D | N | T | S | S | A | Y | I | A | G | F | Y | T | K | F | V | E | N | G | I | S | I | A | T | P | N | K | K | A | F | S | S | D | L | A | T | W | K | A | L | F | S | N | K | P | T | N | G | F | V | Y | H | E | A | T |
Template Known Secondary structure |   |
|
|
| B |
|
|
|  |  |  |  |  |  |  |  | T | T |
| S | S |
|  |  |  |  |  |
| S |
|
|  |  |  |  | T | T |  |  |  |  |  |  | T | T |
|  |  |  |
|
|
|
| T | T | T | S | S |
| S |  |  |  |  |  |  | T | S |
|
| S | S | S |
|
|  |  |
| G | G | G |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
66 | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . |
  |
  |   |
175 | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
Query Sequence |   |
C | G | T | S | M |
Query Conservation |   |
|   |
|   |
|
Alig confidence |   |
|
|
|
|
|
Template Conservation |   |
|   |   |
|   |
Template Sequence |   |
V | G | A | G | L |
Template Known Secondary structure |   |
S | S | T | T | S |
Template Predicted Secondary structure |   |
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
  |   |
146 | . | . | . | 150 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|