Job Description P39334 Confidence 36.10% Date Thu Jan 5 11:59:26 GMT 2012 Rank 462 Aligned Residues 60 % Identity 10% Template d2lfba_ SCOP info DNA/RNA-binding 3-helical bundle Homeodomain-like Homeodomain Resolution UNK

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.		.	.	.	.	.	40	.	.	.	.	.	.																						.	.	.	50	.	.	.	.	.	.	.	.
Predicted Secondary structure																																				.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																				.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	V	T	K	K	Q	S	R	V	P	G	R	P	R	R	F	A	P	E	Q	A	I	S	A	A	K	V	L	F	H	Q	K	G	F	.	D	A	V	S	V	A	E	V	T	D	Y	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	I	N	P	P	S	L	Y	A	A	F	G
Query Conservation																																				.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																				.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		M	A	R	I	D	P	T	K	K	G	R	R	N	R	F	K	W	G	P	A	S	Q	Q	I	L	F	Q	A	Y	E	R	Q	K	N	P	S	K	E	E	R	E	T	L	V	E	E	C	N	R	A	E	C	I	Q	R	G	V	S	P	S	Q	A	Q	G	L	G	S	N	L	V	T	E	V	R	V	Y	N	W	F	A
Template Known Secondary structure									S		S	S		S	S																T	T		S	S			S																			T			G	G	G	G	G	G	G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		0	.	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		59	60
Predicted Secondary structure
Query SS confidence
Query Sequence		S	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	R
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		80	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions