Return to main results Retrieve Phyre Job Id

Job DescriptionP39334
Confidence96.76%DateThu Jan 5 11:59:26 GMT 2012
Rank166Aligned Residues110
% Identity8%Templated2gfna2
SCOP infoTetracyclin repressor-like, C-terminal domain Tetracyclin repressor-like, C-terminal domain Tetracyclin repressor-like, C-terminal domain
Resolution1.90

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   87..90.........100.........110..... ....120.........130.........140......... 150.........160..
Predicted Secondary structure 




.




...


Query SS confidence 




























.

































. . .












Query Sequence  RPVGECLVEVLKEAARRYSQNGGCAGCMV. LEGIHSHDPQARDIAVQYYHAAETTIYDYIARRH. . . PQRAQCVTDFMST
Query Conservation        
                      .                         
        ...       
     
Alig confidence 




























.

































...












Template Conservation 
 
 
 
   
   

 
        




   
     
              
      
      
    
  
 
Template Sequence  AGPIEKLRNITASILPLDERRLAXTRVFLFFYAEGTARGEIAAFLARWRGVVRESVVAAQREGTVSTDLDADAVTVALVA
Template Known Secondary structure 

TTS

S


STSS
TTS
Template Predicted Secondary structure 



















Template SS confidence 















































































   81........90.........100.........110.........120.........130.........140.........150.........160
 
   163......170.........180.........190......
Predicted Secondary structure 




Query SS confidence 

































Query Sequence  VMSGLSAKAREGHSIEQLCATAAMAGEAIKTILE
Query Conservation     

            
      
   
  

 
Alig confidence 

































Template Conservation 
 


    

 
       
       
   
 
Template Sequence  LTDGLALQAILDPVVXKAISAEDAAARCVDAAVR
Template Known Secondary structure  TT
TSTTT
Template Predicted Secondary structure 






Template SS confidence 

































   165....170.........180.........190........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions