Return to main results Retrieve Phyre Job Id

Job DescriptionP39334
Confidence99.51%DateThu Jan 5 11:59:26 GMT 2012
Rank153Aligned Residues61
% Identity21%Templated1z0xa1
SCOP infoDNA/RNA-binding 3-helical bundle Homeodomain-like Tetracyclin repressor-like, N-terminal domain
Resolution2.40

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   15....20.........30. ........40.........50.........60.........70.....
Predicted Secondary structure 


.











Query SS confidence 
















.











































Query Sequence  RFAPEQAISAAKVLFHQ. KGFDAVSVAEVTDYLGINPPSLYAAFGSKAGLFSRVLNEYVGTE
Query Conservation     
  

 

  

  . 
    
   

  



   

  
 

  
    
       
Alig confidence 
















.











































Template Conservation    

  
  

  
  
  
    
   

  



  
 
 

 

  
            
Template Sequence  KLSKDTIIAAAFSLLEKSPTLEQLSXRKVAKQLGVQAPAIYWYFKNKQALLQSXAEAIEEHF
Template Known Secondary structure 

SS

GGG

TS
TT
SST
Template Predicted Secondary structure 













Template SS confidence 





























































   4.....10.........20.........30.........40.........50.........60.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions