Return to main results Retrieve Phyre Job Id

Job DescriptionP39334
Confidence66.01%DateThu Jan 5 11:59:26 GMT 2012
Rank310Aligned Residues29
% Identity17%Templated1vz0a1
SCOP infoDNA/RNA-binding 3-helical bundle KorB DNA-binding domain-like KorB DNA-binding domain-like
Resolution2.3

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   25....30.........40.........50......
Predicted Secondary structure 








Query SS confidence 































Query Sequence  AKVLFHQKGFDAVSVAEVTDYLGINPPSLYAA
Query Conservation 
  

   
    
   

  



   

  
Alig confidence 









...


















Template Conservation 
   
   
 ...
   

  

 
   
   
Template Sequence  GYQALLEMGL. . . TQEEVARRVGKARSTVANA
Template Known Secondary structure  TT
...
T

Template Predicted Secondary structure 


...



Template SS confidence 































   126...130..... ....140.........150....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions