Return to main results Retrieve Phyre Job Id

Job DescriptionP39334
Confidence72.12%DateThu Jan 5 11:59:26 GMT 2012
Rank271Aligned Residues31
% Identity10%Templated1ub9a_
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain MarR-like transcriptional regulators
Resolution2.05

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   24.....30.........40.........50......
Predicted Secondary structure 








Query SS confidence 
































Query Sequence  AAKVLFHQKGFDAVSVAEVTDYLGINPPSLYAA
Query Conservation 

  

   
    
   

  



   

  
Alig confidence 









..




















Template Conservation   

  
    ..  
  


  
 

   

  
Template Sequence  GIMIFLLPRR. . KAPFSQIQKVLDLTPGNLDSH
Template Known Secondary structure  S..TT

Template Predicted Secondary structure 

..





Template SS confidence 
































   20......... 30.........40.........50
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions