Return to main results Retrieve Phyre Job Id

Job DescriptionP39334
Confidence99.57%DateThu Jan 5 11:59:26 GMT 2012
Rank143Aligned Residues69
% Identity22%Templated1jt6a1
SCOP infoDNA/RNA-binding 3-helical bundle Homeodomain-like Tetracyclin repressor-like, N-terminal domain
Resolution2.54

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   18.20.........30.........40.........50.........60.........70.........80......
Predicted Secondary structure 













Query SS confidence 




































































Query Sequence  PEQAISAAKVLFHQKGFDAVSVAEVTDYLGINPPSLYAAFGSKAGLFSRVLNEYVGTEAIPLADILRDD
Query Conservation 
  

 

  

   
    
   

  



   

  
 

  
    
                  
Alig confidence 




































































Template Conservation 
  

 

  
    
    
   

  



  
 
 

  
  
                      
Template Sequence  KDKILGVAKELFIKNGYNATTTGEIVKLSESSKGNLYYHFKTKENLFLEILNIEESKWQEQWKKEQIKA
Template Known Secondary structure 
TTT

TT

SSGGG
Template Predicted Secondary structure 















Template SS confidence 




































































   4.....10.........20.........30.........40.........50.........60.........70..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions