Job Description P39334 Confidence 80.48% Date Thu Jan 5 11:59:26 GMT 2012 Rank 224 Aligned Residues 44 % Identity 18% Template c6paxA_ PDB info PDB header:gene regulation/dna Chain: A: PDB Molecule:homeobox protein pax-6; PDBTitle: crystal structure of the human pax-6 paired domain-dna2 complex reveals a general model for pax protein-dna3 interactions Resolution 2.50 Å

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		4	.	.	.	.	.			10	.	.	.		.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.
Predicted Secondary structure								.	.					.
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Query Sequence		K	K	Q	S	R	V	.	.	P	G	R	P	.	R	R	F	A	P	E	Q	A	I	S	A	A	K	V	L	F	H	Q	K	G	F	D	A	V	S	V	A	E	V	T	D	Y	L	G	I	N	P	P	S	L	Y	A
Query Conservation								.	.					.
Alig confidence								.	.					.														.	.	.	.	.	.	.	.
Template Conservation																												.	.	.	.	.	.	.	.
Template Sequence		N	Q	L	G	G	V	F	V	N	G	R	P	L	P	D	S	T	R	Q	R	I	V	E	L	A	H	.	.	.	.	.	.	.	.	S	G	A	R	P	C	D	I	S	R	I	L	Q	V	S	N	G	C	V	S	K
Template Known Secondary structure			T	T	S					T	T	S																.	.	.	.	.	.	.	.	T	T											T
Template Predicted Secondary structure																												.	.	.	.	.	.	.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.									.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions