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Job DescriptionP39334
Confidence99.88%DateThu Jan 5 11:59:26 GMT 2012
Rank38Aligned Residues177
% Identity12%Templatec3ppbB_
PDB info PDB header:transcription regulatorChain: B: PDB Molecule:putative tetr family transcription regulator; PDBTitle: crystal structure of a putative tetr family transcription regulator2 (shew_3104) from shewanella sp. pv-4 at 2.10 a resolution
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   15....20.........30.........40.........50.........60.........70.........80.........90....
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Query Sequence  RFAPEQAISAAKVLFHQKGFDAVSVAEVTDYLGINPPSLYAAFGSKAGLFSRVLNEYVGTEAIPLADILRDDRPVGECLV
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Template Sequence  RTKKQAILETALQLFVSQGFHGTSTATIAREAGVATGTLFHHFPSKEQLLEQLFLGVKQEFADAIQASVSSRGDLKQDAE
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   7..10.........20.........30.........40.........50.........60.........70.........80......
 
   95....100.........110..... ....120.........130.........140......... 150.........160.........170
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Query Sequence  EVLKEAARRYSQNGGCAGCMV. LEGIHSHDPQARDIAVQYYHAAETTIYDYIARRH. . . PQRAQCVTDFMSTVMSGLSAK
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Template Sequence  QLWFAALTWAXANPLKQAFFQLYSXSPTVEQSVRDQAXHGILGFIAELIRQGQASGELAEYPIELXQDNCHGQYLAATRY
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   87..90.........100.........110.........120.........130.........140.........150.........160......
 
   171........180.........190.
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Query Sequence  AREGHSIEQLCATAAMAGEAI
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Template Sequence  FVDHPERWQQAHERSASFALF
Template Known Secondary structure  SGGGGG
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   167..170.........180.......
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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