Job Description P39334 Confidence 99.90% Date Thu Jan 5 11:59:26 GMT 2012 Rank 19 Aligned Residues 181 % Identity 10% Template c3lwjA_ PDB info PDB header:transcription regulator Chain: A: PDB Molecule:putative tetr-family transcriptional regulator; PDBTitle: crystal structure of putative tetr-family transcriptional regulator2 (yp_752756.1) from syntrophomonas wolfei str. goettingen at 2.07 a3 resolution Resolution 2.07 Å

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		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	R	R	F	A	P	E	Q	A	I	S	A	A	K	V	L	F	H	Q	K	G	F	D	A	V	S	V	A	E	V	T	D	Y	L	G	I	N	P	P	S	L	Y	A	A	F	G	S	K	A	G	L	F	S	R	V	L	N	E	Y	V	G	T	E	A	I	P	L	A	D	I	L	R	D	D	R	P	V	G	E	C
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	N	K	E	R	R	Q	K	I	L	T	C	S	L	D	L	F	I	E	K	G	Y	Y	N	T	S	I	R	D	I	I	A	L	S	E	V	G	T	G	T	F	Y	N	Y	F	V	D	K	E	D	I	L	K	N	L	L	E	D	F	A	K	Q	I	I	S	S	I	S	E	Y	Y	L	V	E	K	D	L	Y	E	R
Template Known Secondary structure																							T	T	T												S										S	S																									T	T
Template Predicted Secondary structure
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.							.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure																																																										.	.	.	.	.	.
Query SS confidence																																																										.	.	.	.	.	.
Query Sequence		L	V	E	V	L	K	E	A	A	R	R	Y	S	Q	N	G	G	C	A	G	C	M	V	L	E	G	I	H	S	H	D	P	Q	A	R	D	I	A	V	Q	Y	Y	H	A	A	E	T	T	I	Y	D	Y	I	A	R	R	.	.	.	.	.	.	H	P	Q	R	A	Q	C	V	T	D	F	M	S	T	V	M	S	G
Query Conservation																																																										.	.	.	.	.	.
Alig confidence																					.	.																																				.	.	.	.	.	.
Template Conservation																					.	.
Template Sequence		F	I	E	T	K	R	L	T	X	E	V	F	A	Q	N	E	T	L	S	.	.	E	I	Y	S	R	V	A	G	S	S	A	P	I	D	Q	C	L	K	Q	F	E	D	R	L	L	E	F	Y	S	R	N	I	E	Y	G	I	K	K	G	V	F	K	N	V	P	V	S	P	I	A	H	S	I	L	A	I	E	K	F
Template Known Secondary structure																T					.	.							T	T	S																													T	T	S	S
Template Predicted Secondary structure																					.	.
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.			.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
		167	.	.	170	.				.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
Predicted Secondary structure							.	.	.
Query SS confidence							.	.	.
Query Sequence		L	S	A	K	A	.	.	.	R	E	G	H	S	I	E	Q	L	C	A	T	A	A	M	A	G	E	A	I	K	T	I	L
Query Conservation							.	.	.
Alig confidence							.	.	.
Template Conservation
Template Sequence		S	L	Y	K	W	V	V	L	K	A	I	T	K	E	E	X	I	E	X	V	L	S	F	H	K	T	L	A	V	G	L	L
Template Known Secondary structure								T	T			S																				S
Template Predicted Secondary structure
Template SS confidence
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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