Job Description P39334 Confidence 99.81% Date Thu Jan 5 11:59:26 GMT 2012 Rank 101 Aligned Residues 168 % Identity 11% Template c3kkcB_ PDB info PDB header:transcription regulator Chain: B: PDB Molecule:tetr family transcriptional regulator; PDBTitle: the crystal structure of tetr transcriptional regulator from2 streptococcus agalactiae 2603v Resolution 2.50 Å

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		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	P	R	R	F	A	P	E	Q	A	I	S	A	A	K	V	L	F	H	Q	K	G	F	D	A	V	S	V	A	E	V	T	D	Y	L	G	I	N	P	P	S	L	Y	A	A	F	G	S	K	A	G	L	F	S	R	V	L	N	E	Y	V	G	T	E	A	I	P	L	A	D	I	L	R	D	D	R	P	V	G	E
Query Conservation
Alig confidence																																																																		.	.	.	.	.	.	.	.	.
Template Conservation																																																																		.	.	.	.	.	.	.	.	.
Template Sequence		R	Q	I	Q	K	T	K	V	A	I	Y	N	A	F	I	S	L	L	Q	E	N	D	Y	S	K	I	T	V	Q	D	V	I	G	L	A	N	V	G	R	S	T	F	Y	S	H	Y	E	S	K	E	V	L	L	K	E	L	C	E	D	L	F	H	H	L	.	.	.	.	.	.	.	.	.	F	K	Q	G	R	D	V
Template Known Secondary structure																				T	S	S		G	G	G											T											S	S																	.	.	.	.	.	.	.	.	.	S	S
Template Predicted Secondary structure																																																																		.	.	.	.	.	.	.	.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.										.	70	.	.	.	.	.
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	L	V	E	V	L	K	E	A	A	R	R	Y	S	Q	N	G	G	C	A	G	C	M	V	L	E	G	I	H	S	H	D	P	Q	A	R	D	I	A	V	Q	Y	Y	H	A	A	E	T	T	I	Y	D	Y	I	A	R	R	H	P	Q	R	A	Q	C	V	T	D	F	M	S	T	V	M	S	G	L	S	A	K	A
Query Conservation
Alig confidence																													.	.	.
Template Conservation																													.	.	.
Template Sequence		T	F	E	E	Y	L	V	H	I	L	K	H	F	E	Q	N	Q	D	S	I	A	T	L	L	L	S	D	.	.	.	D	P	Y	F	L	L	R	F	R	S	E	L	E	H	D	V	Y	P	R	L	R	E	E	Y	I	T	K	V	D	I	P	E	D	F	L	K	Q	F	L	L	S	S	F	I	E	T	L	K	W	W
Template Known Secondary structure																	T	T	T	S								T	.	.	.																T												T	T	S
Template Predicted Secondary structure																													.	.	.
Template SS confidence
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.				.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	E	G	H	S	I	E	Q	L	C	A	T	A	A	M	A	G	E	A	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	H	Q	R	Q	K	X	T	V	E	D	L	L	K	Y	Y	L	T	X	V
Template Known Secondary structure			T		T	T
Template Predicted Secondary structure
Template SS confidence
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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