Return to main results Retrieve Phyre Job Id

Job DescriptionP39334
Confidence38.61%DateThu Jan 5 11:59:26 GMT 2012
Rank447Aligned Residues35
% Identity26%Templatec3ketA_
PDB info PDB header:transcription/dnaChain: A: PDB Molecule:redox-sensing transcriptional repressor rex; PDBTitle: crystal structure of a rex-family transcriptional regulatory protein2 from streptococcus agalactiae bound to a palindromic operator
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   24.....30.........40.........50... .....
Predicted Secondary structure 








...

Query SS confidence 





























. . .




Query Sequence  AAKVLFHQKGFDAVSVAEVTDYLGINPPSL. . . YAAFG
Query Conservation 

  

   
    
   

  



   
...
  
 
Alig confidence 





























...




Template Conservation    
  
   
   


  

   

    





  
Template Sequence  RIFKRFNTDGIEKASSKQIADALGIDSATVRRDFSYFG
Template Known Secondary structure  TT


TS
TT
Template Predicted Secondary structure 






Template SS confidence 





































   20.........30.........40.........50.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions