Job Description P39334 Confidence 99.87% Date Thu Jan 5 11:59:26 GMT 2012 Rank 48 Aligned Residues 173 % Identity 17% Template c3he0A_ PDB info PDB header:transcription regulator Chain: A: PDB Molecule:transcriptional regulator, tetr family; PDBTitle: the structure of a putative transcriptional regulator tetr family2 protein from vibrio parahaemolyticus. Resolution 2.20 Å

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		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	P	E	Q	A	I	S	A	A	K	V	L	F	H	Q	K	G	F	D	A	V	S	V	A	E	V	T	D	Y	L	G	I	N	P	P	S	L	Y	A	A	F	G	S	K	A	G	L	F	S	R	V	L	N	E	Y	V	G	T	E	A	I	P	L	A	D	I	L	R	D	D	R	P	V	G	E	C	L	V	E	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	R	D	Q	I	L	A	A	A	E	Q	L	I	A	E	S	G	F	Q	G	L	S	X	Q	K	L	A	N	E	A	G	V	A	A	G	T	I	Y	R	Y	F	S	D	K	E	H	L	L	E	E	V	R	L	N	V	A	K	R	I	A	S	A	V	Q	A	G	V	N	D	D	X	P	L	K	E	R	Y	R	T	X
Template Known Secondary structure																			T	T	T											T	S							T	T		S	S																					T	T	T			T	T	S
Template Predicted Secondary structure
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.			150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
Predicted Secondary structure																																																							.	.
Query SS confidence																																																							.	.
Query Sequence		L	K	E	A	A	R	R	Y	S	Q	N	G	G	C	A	G	C	M	V	L	E	G	I	H	S	H	D	P	Q	A	R	D	I	A	V	Q	Y	Y	H	A	A	E	T	T	I	Y	D	Y	I	A	R	R	H	.	.	P	Q	R	A	Q	C	V	T	D	F	M	S	T	V	M	S	G	L	S	A	K	A	R	E	G
Query Conservation																																																							.	.
Alig confidence																										.	.																												.	.
Template Conservation																										.	.
Template Sequence		W	L	N	I	W	N	L	A	G	S	N	L	N	A	I	S	N	R	V	L	P	C	T	T	.	.	R	N	K	T	W	E	L	E	R	K	X	F	A	Q	V	D	R	L	F	N	Q	G	K	E	E	G	V	F	K	P	L	D	N	E	V	L	S	G	L	S	F	E	A	S	V	A	L	A	R	K	H	A	L	G
Template Known Secondary structure								T	T	T	S							T	T							.	.											T	T													T	T		B		S										T													T	T
Template Predicted Secondary structure																										.	.
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.			.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
					175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
Predicted Secondary structure		.	.	.
Query SS confidence		.	.	.
Query Sequence		.	.	.	H	S	I	E	Q	L	C	A	T	A	A	M	A	G	E	A	I
Query Conservation		.	.	.
Alig confidence		.	.	.
Template Conservation
Template Sequence		F	Y	Q	L	D	D	D	A	L	E	A	A	I	E	A	S	W	D	A	I
Template Known Secondary structure		S
Template Predicted Secondary structure
Template SS confidence
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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