Job Description P39334 Confidence 99.90% Date Thu Jan 5 11:59:26 GMT 2012 Rank 17 Aligned Residues 179 % Identity 16% Template c3f1bA_ PDB info PDB header:transcription regulator Chain: A: PDB Molecule:tetr-like transcriptional regulator; PDBTitle: the crystal structure of a tetr-like transcriptional regulator from2 rhodococcus sp. rha1. Resolution 2.40 Å

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		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	P	R	R	F	A	P	E	Q	A	I	S	A	A	K	V	L	F	H	Q	K	G	F	D	A	V	S	V	A	E	V	T	D	Y	L	G	I	N	P	P	S	L	Y	A	A	F	G	S	K	A	G	L	F	S	R	V	L	N	E	Y	V	G	T	E	A	I	P	L	A	D	I	L	R	D	D	R	P	V	G	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	P	R	A	V	R	E	Q	Q	X	L	D	A	A	V	D	V	F	S	D	R	G	F	H	E	T	S	X	D	A	I	A	A	K	A	E	I	S	K	P	X	L	Y	L	Y	Y	G	S	K	D	E	L	F	A	A	C	I	Q	R	E	G	L	R	F	V	E	A	L	A	P	A	G	D	P	G	L	S	P	R	E
Template Known Secondary structure																								T	T	T										T	T	S											S																					G	G	G	G		T	T
Template Predicted Secondary structure
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	L	V	E	V	L	K	E	A	A	R	R	Y	S	Q	N	G	G	C	A	G	C	M	V	L	E	G	I	H	S	H	D	P	Q	A	R	D	I	A	V	Q	Y	Y	H	A	A	E	T	T	I	Y	D	Y	I	A	R	R	H	P	Q	R	A	Q	C	V	T	D	F	M	S	T	V	M	S	G	L	S	A	K	A
Query Conservation
Alig confidence																										.	.	.
Template Conservation																										.	.	.
Template Sequence		Q	L	R	R	A	L	E	G	F	L	G	F	V	G	K	H	R	K	S	W	X	V	L	Y	.	.	.	R	Q	A	X	Q	Q	A	F	V	G	S	V	Q	S	S	R	D	R	L	I	E	L	T	A	H	L	L	E	S	S	T	K	Q	D	F	E	L	I	A	I	A	L	V	G	A	G	E	A	V	A	D	R	V
Template Known Secondary structure																										.	.	.							T	T	T	T	T																			S
Template Predicted Secondary structure																										.	.	.
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.				.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	E	G	H	S	I	E	Q	L	C	A	T	A	A	M	A	G	E	A	I	K	T	I	L
Query Conservation
Alig confidence							.	.
Template Conservation							.	.
Template Sequence		A	G	G	E	I	.	.	E	V	D	A	A	A	D	L	L	E	S	L	A	W	R	G	L
Template Known Secondary structure			T	T	S	S	.	.
Template Predicted Secondary structure							.	.
Template SS confidence
		171	.	.	.	.			.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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