Job Description P39334 Confidence 99.93% Date Thu Jan 5 11:59:26 GMT 2012 Rank 4 Aligned Residues 191 % Identity 10% Template c3e7qB_ PDB info PDB header:transcription regulator Chain: B: PDB Molecule:transcriptional regulator; PDBTitle: the crystal structure of the putative transcriptional regulator from2 pseudomonas aeruginosa pao1 Resolution 2.20 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	T	K	K	Q	S	R	V	P	G	R	P	R	R	F	A	P	E	Q	A	I	S	A	A	K	V	L	F	H	Q	K	G	F	D	A	V	S	V	A	E	V	T	D	Y	L	G	I	N	P	P	S	L	Y	A	A	F	G	S	K	A	G	L	F	S	R	V	L	N	E	Y	V	G	T	E	A	I	P	L	A	D
Query Conservation
Alig confidence							.
Template Conservation							.
Template Sequence		M	N	Q	E	V	.	R	F	S	R	L	E	P	E	Q	R	K	A	L	L	I	E	A	T	L	A	C	L	K	R	H	G	F	Q	G	A	S	V	R	K	I	C	A	E	A	G	V	S	V	G	L	I	N	H	H	Y	D	G	K	D	A	L	V	A	E	A	Y	L	A	V	T	G	R	V	M	R	L	L	R	G
Template Known Secondary structure				T			.				S	S																																			T	S
Template Predicted Secondary structure							.
Template SS confidence
		1	.	.	.	.		.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		82	.	.	.	.	.		.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.		.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.							.	150	.	.	.
Predicted Secondary structure								.																													.																																		.	.	.	.	.	.
Query SS confidence								.																													.																																		.	.	.	.	.	.
Query Sequence		I	L	R	D	D	R	.	P	V	G	E	C	L	V	E	V	L	K	E	A	A	R	R	Y	S	Q	N	G	G	C	A	G	C	M	V	.	L	E	G	I	H	S	H	D	P	Q	A	R	D	I	A	V	Q	Y	Y	H	A	A	E	T	T	I	Y	D	Y	I	A	R	R	.	.	.	.	.	.	H	P	Q	R	A
Query Conservation								.																													.																																		.	.	.	.	.	.
Alig confidence								.																													.																																		.	.	.	.	.	.
Template Conservation
Template Sequence		A	I	D	T	A	P	G	G	A	R	P	R	L	S	A	F	F	E	A	S	F	S	A	E	L	L	D	P	Q	L	L	D	A	W	L	A	F	W	G	A	V	G	S	I	E	A	I	G	R	V	H	D	H	S	Y	G	E	Y	R	A	L	L	V	G	V	L	R	Q	L	A	E	E	G	G	W	A	D	F	D	A
Template Known Secondary structure					T	S		S	S													T	S						G	G	G												T	T																															T		S	S
Template Predicted Secondary structure
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.				.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
Predicted Secondary structure																					.	.	.
Query SS confidence																					.	.	.
Query Sequence		Q	C	V	T	D	F	M	S	T	V	M	S	G	L	S	A	K	A	R	.	.	.	E	G	H	S	I	E	Q	L	C	A	T	A	A	M	A	G	E	A	I	K	T
Query Conservation																					.	.	.
Alig confidence																					.	.	.
Template Conservation
Template Sequence		E	L	A	A	I	S	L	S	A	L	L	D	G	L	W	L	E	S	G	L	N	P	A	T	F	T	P	R	Q	G	V	Q	I	C	E	A	W	V	D	G	L	E	A
Template Known Secondary structure																							T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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