Job Description P39334 Confidence 99.87% Date Thu Jan 5 11:59:26 GMT 2012 Rank 54 Aligned Residues 173 % Identity 17% Template c3dcfB_ PDB info PDB header:transcription regulator Chain: B: PDB Molecule:transcriptional regulator of the tetr/acrr PDBTitle: crystal structure of transcriptional regulator of the2 tetr/acrr family (yp_290855.1) from thermobifida fusca yx-3 er1 at 2.50 a resolution Resolution 2.50 Å

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		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	P	E	Q	A	I	S	A	A	K	V	L	F	H	Q	K	G	F	D	A	V	S	V	A	E	V	T	D	Y	L	G	I	N	P	P	S	L	Y	A	A	F	G	S	K	A	G	L	F	S	R	V	L	N	E	Y	V	G	T	E	A	I	P	L	A	D	I	L	R	D	D	R	P	V	G	E	C	L	V	E	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	R	T	Q	I	I	K	V	A	T	E	L	F	R	E	K	G	Y	Y	A	T	S	L	D	D	I	A	D	R	I	G	F	T	K	P	A	I	Y	Y	Y	F	K	S	K	E	D	V	L	F	A	I	V	N	S	I	V	D	E	A	L	E	R	F	H	A	I	A	A	G	P	G	S	P	G	E	R	I	H	A	L
Template Known Secondary structure																	T		T	T	T											T											S	S																									T	S	S	S
Template Predicted Secondary structure
Template SS confidence
		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.			150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
Predicted Secondary structure																																																							.	.
Query SS confidence																																																							.	.
Query Sequence		L	K	E	A	A	R	R	Y	S	Q	N	G	G	C	A	G	C	M	V	L	E	G	I	H	S	H	D	P	Q	A	R	D	I	A	V	Q	Y	Y	H	A	A	E	T	T	I	Y	D	Y	I	A	R	R	H	.	.	P	Q	R	A	Q	C	V	T	D	F	M	S	T	V	M	S	G	L	S	A	K	A	R	E	G
Query Conservation																																																							.	.
Alig confidence																			.																																				.	.																					.
Template Conservation																			.																																																										.
Template Sequence		L	V	E	H	T	R	T	I	L	R	N	L	D	A	N	T	L	.	F	Y	N	L	S	P	E	R	E	R	E	X	R	K	R	E	R	E	Y	T	E	I	X	Q	R	L	Y	A	E	G	V	A	T	G	E	L	L	D	V	D	P	T	V	A	T	A	T	L	L	G	A	A	I	W	T	Y	R	.	W	Y	D	P
Template Known Secondary structure												S							.																																	T	T	S	S			S															T				.				T
Template Predicted Secondary structure																			.																																																										.
Template SS confidence
		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.		.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.		.	.	.	.
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	S	I	E	Q	L	C	A	T	A	A	M	A	G	E	A	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	G	R	L	S	A	D	E	V	V	E	Q	I	T	R	L	L
Template Known Secondary structure		T	S	S	S
Template Predicted Secondary structure
Template SS confidence
		193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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