Job Description P39334 Confidence 99.82% Date Thu Jan 5 11:59:26 GMT 2012 Rank 93 Aligned Residues 172 % Identity 17% Template c3cdlA_ PDB info PDB header:transcription regulator Chain: A: PDB Molecule:transcriptional regulator aefr; PDBTitle: crystal structure of a tetr family transcriptional regulator from2 pseudomonas syringae pv. tomato str. dc3000 Resolution 2.36 Å

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		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	F	A	P	E	Q	A	I	S	A	A	K	V	L	F	H	Q	K	G	F	D	A	V	S	V	A	E	V	T	D	Y	L	G	I	N	P	P	S	L	Y	A	A	F	G	S	K	A	G	L	F	S	R	V	L	N	E	Y	V	G	T	E	A	I	P	L	A	D	I	L	R	D	D	R	P	V	G	E	C	L	V
Query Conservation
Alig confidence																																																															.	.	.	.
Template Conservation																																																															.	.	.	.
Template Sequence		D	Q	K	R	E	S	I	V	Q	A	A	I	A	E	F	G	D	R	G	F	E	I	T	S	X	D	R	I	A	A	R	A	E	V	S	K	R	T	V	Y	N	H	F	P	S	K	E	E	L	F	A	E	X	L	Q	R	L	W	N	C	A	.	.	.	.	E	V	V	Y	R	P	L	V	S	L	R	E	Q	L	L
Template Known Secondary structure																					T	T	T										T	T	S							T	T	S	S	S															T		.	.	.	.			S			T	T	S
Template Predicted Secondary structure																																																															.	.	.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.					.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.		.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
Predicted Secondary structure																																				.																																												.	.
Query SS confidence																																				.																																												.	.
Query Sequence		E	V	L	K	E	A	A	R	R	Y	S	Q	N	G	G	C	A	G	C	M	V	L	E	G	I	H	S	H	D	P	Q	A	R	D	.	I	A	V	Q	Y	Y	H	A	A	E	T	T	I	Y	D	Y	I	A	R	R	H	P	Q	R	A	Q	C	V	T	D	F	M	S	T	V	M	S	G	L	S	A	K	A	.	.
Query Conservation																																				.																																												.	.
Alig confidence																																				.																			.																									.	.
Template Conservation																																																							.
Template Sequence		E	L	L	W	G	K	X	R	N	L	T	D	S	S	F	L	D	L	A	R	V	V	V	G	A	T	I	H	S	P	E	R	A	Q	V	W	L	E	E	T	F	S	A	W	I	R	A	A	Q	K	D	G	R	.	L	K	P	V	D	P	G	F	A	A	T	Q	X	H	A	L	L	K	S	F	A	F	W	P	Q	V
Template Known Secondary structure												T																	S						T	T																T	T		.	B		S																			T
Template Predicted Secondary structure																																																							.
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.		.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
					172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
Predicted Secondary structure		.	.	.
Query SS confidence		.	.	.
Query Sequence		.	.	.	R	E	G	H	S	I	E	Q	L	C	A	T	A	A	M	A	G	E	A	I
Query Conservation		.	.	.
Alig confidence		.	.	.
Template Conservation
Template Sequence		T	F	N	A	A	L	L	T	P	Q	E	Q	S	N	V	V	E	S	A	L	N	X	F
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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