Job Description P39334 Confidence 99.90% Date Thu Jan 5 11:59:26 GMT 2012 Rank 15 Aligned Residues 176 % Identity 15% Template c3bruA_ PDB info PDB header:transcription Chain: A: PDB Molecule:regulatory protein, tetr family; PDBTitle: crystal structure of regulatory protein tetr from rhodobacter2 sphaeroides Resolution 2.30 Å

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		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.		.	.	90	.	.
Predicted Secondary structure																																																																												.
Query SS confidence																																																																												.
Query Sequence		R	R	F	A	P	E	Q	A	I	S	A	A	K	V	L	F	H	Q	K	G	F	D	A	V	S	V	A	E	V	T	D	Y	L	G	I	N	P	P	S	L	Y	A	A	F	G	S	K	A	G	L	F	S	R	V	L	N	E	Y	V	G	T	E	A	I	P	L	A	D	I	L	R	D	D	R	.	P	V	G	E	C
Query Conservation																																																																												.
Alig confidence																																																																												.
Template Conservation
Template Sequence		A	S	L	A	H	Q	S	L	I	R	A	G	L	E	H	L	T	E	K	G	Y	S	S	V	G	V	D	E	I	L	K	A	A	R	V	P	K	G	S	F	Y	H	Y	F	R	N	K	A	D	F	G	L	A	L	I	E	A	Y	D	T	Y	F	A	R	L	L	D	Q	A	F	L	D	G	S	L	A	P	L	A	R
Template Known Secondary structure		G	G	G																S		T	T	T											T											S	S																									T		T	T	S
Template Predicted Secondary structure
Template SS confidence
		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.				.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.								.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure																								.	.	.																																		.	.	.	.	.	.	.
Query SS confidence																								.	.	.																																		.	.	.	.	.	.	.
Query Sequence		L	V	E	V	L	K	E	A	A	R	R	Y	S	Q	N	G	G	C	A	G	C	M	.	.	.	V	L	E	G	I	H	S	H	D	P	Q	A	R	D	I	A	V	Q	Y	Y	H	A	A	E	T	T	I	Y	D	Y	I	A	R	.	.	.	.	.	.	.	R	H	P	Q	R	A	Q	C	V	T	D	F	M	S	T
Query Conservation																								.	.	.																																		.	.	.	.	.	.	.
Alig confidence																								.	.	.																																		.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	R	L	F	T	R	X	A	E	E	G	X	A	R	H	G	F	R	R	G	C	L	V	G	N	L	G	Q	E	X	G	A	L	P	D	D	F	R	A	A	L	I	G	V	L	E	T	W	Q	R	R	T	A	Q	L	F	R	E	A	Q	A	C	G	E	L	S	A	D	H	D	P	D	A	L	A	E	A	F	W	I
Template Known Secondary structure															T	T	T	T												T	G	G	G	S		T																										T	T	T	S	S		T	T	S
Template Predicted Secondary structure
Template SS confidence
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	M	S	G	L	S	A	K	A	R	E	G	H	S	I	E	Q	L	C	A	T	A	A	M	A	G	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	W	E	G	A	I	L	R	A	K	L	E	L	R	P	D	P	L	H	S	F	T	R	T	F	G	R
Template Known Secondary structure														T	S	S											G	G
Template Predicted Secondary structure
Template SS confidence
		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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