Job Description P39334 Confidence 99.85% Date Thu Jan 5 11:59:26 GMT 2012 Rank 72 Aligned Residues 171 % Identity 18% Template c3bjbE_ PDB info PDB header:transcription regulator Chain: E: PDB Molecule:probable transcriptional regulator, tetr family protein; PDBTitle: crystal structure of a tetr transcriptional regulator from rhodococcus2 sp. rha1 Resolution 2.50 Å

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		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	R	F	A	P	E	Q	A	I	S	A	A	K	V	L	F	H	Q	K	G	F	D	A	V	S	V	A	E	V	T	D	Y	L	G	I	N	P	P	S	L	Y	A	A	F	G	S	K	A	G	L	F	S	R	V	L	N	E	Y	V	G	T	E	A	I	P	L	A	D	I	L	R	D	D	R	P	V	G	E	C	L
Query Conservation
Alig confidence																																																																	.	.	.	.	.	.
Template Conservation																																																																	.	.	.	.	.	.
Template Sequence		Q	R	A	R	H	V	R	X	L	E	A	A	I	E	L	A	T	E	K	E	L	A	R	V	Q	X	H	E	V	A	K	R	A	G	V	A	I	G	T	L	Y	R	Y	F	P	S	K	T	H	L	F	V	A	V	X	V	D	Q	I	D	R	X	G	.	.	.	.	.	.	V	P	P	G	E	S	P	Q	D	A	V
Template Known Secondary structure																				S		G	G	G											T											S	S																		.	.	.	.	.	.				S
Template Predicted Secondary structure																																																																	.	.	.	.	.	.
Template SS confidence
		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80							.	.	.	.	.	.	.	.	.	90	.
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.		.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
Predicted Secondary structure																																																													.
Query SS confidence																																																													.
Query Sequence		V	E	V	L	K	E	A	A	R	R	Y	S	Q	N	G	G	C	A	G	C	M	V	L	E	G	I	H	S	H	D	P	Q	A	R	D	I	A	V	Q	Y	Y	H	A	A	E	T	T	I	Y	D	Y	I	A	R	R	H	P	Q	R	.	A	Q	C	V	T	D	F	M	S	T	V	M	S	G	L	S	A	K	A	R
Query Conservation																																																													.
Alig confidence																										.																																			.
Template Conservation																										.
Template Sequence		Y	N	V	L	V	R	A	T	R	G	L	L	R	R	P	A	L	S	T	A	X	I	Q	S	.	T	S	T	A	N	V	A	S	V	P	D	A	G	K	V	D	R	A	F	R	Q	I	X	L	D	A	A	G	I	E	H	P	T	E	E	D	L	T	A	L	R	L	L	V	Q	L	W	F	G	V	I	Q	S	C	L
Template Known Secondary structure															S											.			S			T	T	T		G	G	G	T															T		S	S
Template Predicted Secondary structure																										.
Template SS confidence
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.		.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
		173	.	.		.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
Predicted Secondary structure					.
Query SS confidence					.
Query Sequence		E	G	H	.	S	I	E	Q	L	C	A	T	A	A	M	A	G	E	A	I
Query Conservation					.
Alig confidence					.
Template Conservation
Template Sequence		N	G	R	V	S	I	P	D	A	E	S	D	I	R	R	A	C	D	L	L
Template Known Secondary structure		T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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