Job Description P39334 Confidence 99.85% Date Thu Jan 5 11:59:26 GMT 2012 Rank 75 Aligned Residues 171 % Identity 14% Template c3b81A_ PDB info PDB header:transcription regulator Chain: A: PDB Molecule:transcriptional regulator, acrr family; PDBTitle: crystal structure of predicted dna-binding transcriptional regulator2 of tetr/acrr family (np_350189.1) from clostridium acetobutylicum at3 2.10 a resolution Resolution 2.10 Å

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		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	F	A	P	E	Q	A	I	S	A	A	K	V	L	F	H	Q	K	G	F	D	A	V	S	V	A	E	V	T	D	Y	L	G	I	N	P	P	S	L	Y	A	A	F	G	S	K	A	G	L	F	S	R	V	L	N	E	Y	V	G	T	E	A	I	P	L	A	D	I	L	R	D	D	R	P	V	G	E	C	L	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	N	K	R	T	E	L	A	N	K	I	W	D	I	F	I	A	N	G	Y	E	N	T	T	L	A	F	I	I	N	K	L	G	I	S	K	G	A	L	Y	H	Y	F	S	S	K	E	E	C	A	D	A	A	I	E	N	R	V	A	F	F	S	N	E	V	L	K	E	S	E	E	G	L	N	S	I	E	R	L	K
Template Known Secondary structure																					S	T	T											T								T	T		S	S																										T	T
Template Predicted Secondary structure
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.			.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
Predicted Secondary structure																																																								.	.
Query SS confidence																																																								.	.
Query Sequence		E	V	L	K	E	A	A	R	R	Y	S	Q	N	G	G	C	A	G	C	M	V	L	E	G	I	H	S	H	D	P	Q	A	R	D	I	A	V	Q	Y	Y	H	A	A	E	T	T	I	Y	D	Y	I	A	R	R	.	.	H	P	Q	R	A	Q	C	V	T	D	F	M	S	T	V	M	S	G	L	S	A	K	A	R
Query Conservation																																																								.	.
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.																								.	.
Template Conservation																						.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	I	L	L	A	G	I	I	N	S	P	S	N	K	I	F	H	Q	K	L	.	.	.	.	.	.	.	.	.	.	.	X	V	A	I	I	K	Y	F	A	P	I	Y	A	D	I	I	S	Q	G	N	E	E	G	V	F	K	V	K	Y	P	L	E	T	A	E	I	I	L	T	L	S	H	F	Y	L	D	E	D	L
Template Known Secondary structure					T																	.	.	.	.	.	.	.	.	.	.	.																							T	S				S															T	T	T
Template Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.												.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	G	H	S	I	E	Q	L	C	A	T	A	A	M	A	G	E	A	I	K	T	I	L	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	K	W	K	K	E	D	X	S	L	K	L	T	A	F	K	E	T	L	I	K	I	L	D
Template Known Secondary structure			T			G	G	G																	T
Template Predicted Secondary structure
Template SS confidence
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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