Job Description P39334 Confidence 99.75% Date Thu Jan 5 11:59:26 GMT 2012 Rank 117 Aligned Residues 143 % Identity 10% Template c2wgbB_ PDB info PDB header:transcription Chain: B: PDB Molecule:tetr family transcriptional repressor lfrr; PDBTitle: crystal structure of the tetr-like transcriptional2 regulator lfrr from mycobacterium smegmatis Resolution 2.00 Å

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		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	A	I	S	A	A	K	V	L	F	H	Q	K	G	F	D	A	V	S	V	A	E	V	T	D	Y	L	G	I	N	P	P	S	L	Y	A	A	F	G	S	K	A	G	L	F	S	R	V	L	N	E	Y	V	G	T	E	A	I	P	L	A	D	I	L	R	D	D	R	P	V	G	E	C	L	V	E	V	L	K	E
Query Conservation
Alig confidence																.	.
Template Conservation																.	.
Template Sequence		A	I	L	D	A	A	M	L	V	L	A	D	H	P	.	.	T	A	A	L	G	D	I	A	A	A	A	G	V	G	R	S	T	V	H	R	Y	Y	P	E	R	T	D	L	L	R	A	L	A	R	H	V	H	D	L	S	N	A	A	I	E	R	A	D	P	T	S	G	P	V	D	A	A	L	R	R	V	V	E	S
Template Known Secondary structure															T	.	.	T											T											S	S																									T	T	S	S
Template Predicted Secondary structure																.	.
Template SS confidence
		17	.	.	20	.	.	.	.	.	.	.	.	.	30			.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.		.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure																		.
Query SS confidence																		.
Query Sequence		A	A	R	R	Y	S	Q	N	G	G	C	A	G	C	M	V	.	L	E	G	I	H	S	H	D	P	Q	A	R	D	I	A	V	Q	Y	Y	H	A	A	E	T	T	I	Y	D	Y	I	A	R	R	H	P	Q	R	A	Q	C	V	T	D	F	M	S	T	V	M	S	G
Query Conservation																		.
Alig confidence																		.																																				.	.
Template Conservation																																																						.	.
Template Sequence		Q	L	D	L	G	P	I	V	L	F	V	Y	Y	E	P	S	D	E	A	I	V	E	V	L	N	E	Y	P	P	G	W	A	R	R	V	F	W	A	L	M	Q	A	G	Y	E	A	A	K	D	G	M	P	.	.	R	H	Q	I	V	D	A	I	M	T	S	L	T	S
Template Known Secondary structure							T																							T	T																				T			.	.
Template Predicted Secondary structure																																																						.	.
Template SS confidence
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.			.	.	.	150	.	.	.	.	.	.	.	.	.	160

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions