Job Description P39334 Confidence 99.84% Date Thu Jan 5 11:59:26 GMT 2012 Rank 89 Aligned Residues 169 % Identity 17% Template c2rekA_ PDB info PDB header:transcription Chain: A: PDB Molecule:putative tetr-family transcriptional regulator; PDBTitle: crystal structure of tetr-family transcriptional regulator Resolution 1.86 Å

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		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	F	A	P	E	Q	A	I	S	A	A	K	V	L	F	H	Q	K	G	F	D	A	V	S	V	A	E	V	T	D	Y	L	G	I	N	P	P	S	L	Y	A	A	F	G	S	K	A	G	L	F	S	R	V	L	N	E	Y	V	G	T	E	A	I	P	L	A	D	I	L	R	D	D	R	P	V	G	E	C	L	V
Query Conservation
Alig confidence																						.																																																				.
Template Conservation																						.																																																				.
Template Sequence		R	R	N	Y	D	R	I	I	E	A	A	A	A	E	V	A	R	H	G	A	.	D	A	S	L	E	E	I	A	R	R	A	G	V	G	S	A	T	L	H	R	H	F	P	S	R	W	G	L	L	Q	A	V	F	Q	E	R	V	A	Q	L	C	D	E	A	R	S	L	A	A	E	H	.	P	P	A	T	A	L	T
Template Known Secondary structure																				G	G	.	G											T											S	S																											S	.
Template Predicted Secondary structure																						.																																																				.
Template SS confidence
		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.		.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.		.	.	.	.	90	.	.
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	V	L	K	E	A	A	R	R	Y	S	Q	N	G	G	C	A	G	C	M	V	L	E	G	I	H	S	H	D	P	Q	A	R	D	I	A	V	Q	Y	Y	H	A	A	E	T	T	I	Y	D	Y	I	A	R	R	H	P	Q	R	A	Q	C	V	T	D	F	M	S	T	V	M	S	G	L	S	A	K	A	R	E	G
Query Conservation
Alig confidence																	.	.	.	.	.																																																		.	.	.
Template Conservation																	.	.	.	.	.																																																		.	.	.
Template Sequence		R	W	L	T	S	L	A	V	F	G	A	V	T	R	G	.	.	.	.	.	A	A	R	S	L	A	A	L	D	S	R	C	E	Q	L	L	T	E	A	G	A	D	L	L	A	R	A	Q	E	D	G	T	V	R	D	D	V	T	A	L	E	L	L	S	L	A	N	A	V	.	.	.	S	L	A	A	E	H	T	P
Template Known Secondary structure																	.	.	.	.	.		G	G	G																										T	T	S	S		T	T														.	.	.					T	T	S	T
Template Predicted Secondary structure																	.	.	.	.	.																																																		.	.	.
Template SS confidence
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.						.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.				.	.	.	160	.	.	.	.
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	S	I	E	Q	L	C	A	T	A	A	M	A	G	E	A	I	K	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	A	A	H	H	A	T	R	L	M	G	I	A	L	G	G	L	G	A
Template Known Secondary structure		T																S
Template Predicted Secondary structure
Template SS confidence
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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