Job Description P39334 Confidence 99.88% Date Thu Jan 5 11:59:26 GMT 2012 Rank 41 Aligned Residues 183 % Identity 20% Template c2raeA_ PDB info PDB header:transcription Chain: A: PDB Molecule:transcriptional regulator, acrr family protein; PDBTitle: crystal structure of a tetr/acrr family transcriptional regulator from2 rhodococcus sp. rha1 Resolution 2.20 Å

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		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
Predicted Secondary structure
Query SS confidence
Query Sequence		G	R	P	R	R	F	A	P	E	Q	A	I	S	A	A	K	V	L	F	H	Q	K	G	F	D	A	V	S	V	A	E	V	T	D	Y	L	G	I	N	P	P	S	L	Y	A	A	F	G	S	K	A	G	L	F	S	R	V	L	N	E	Y	V	G	T	E	A	I	P	L	A	D	I	L	R	D	D	R	P	V	G
Query Conservation
Alig confidence																																																																												.
Template Conservation																																																																												.
Template Sequence		G	R	R	P	S	T	T	Q	D	R	I	S	T	V	G	I	E	L	F	T	E	Q	G	F	D	A	T	S	V	D	E	V	A	E	A	S	G	I	A	R	R	T	L	F	R	Y	F	P	S	K	N	A	I	P	W	G	D	F	D	A	H	L	A	E	M	R	A	Q	L	A	A	Q	P	D	.	D	I	P	I	V
Template Known Secondary structure				S																					T	T	T	S									T	T	S										S	S	T	T	T	G	G	G		S															S		T	.	T	S
Template Predicted Secondary structure																																																																												.
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.		.	.	.	.	90
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.						.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure																																																																.	.	.	.	.
Query SS confidence																																																																.	.	.	.	.
Query Sequence		E	C	L	V	E	V	L	K	E	A	A	R	R	Y	S	Q	N	G	G	C	A	G	C	M	V	L	E	G	I	H	S	H	D	P	Q	A	R	D	I	A	V	Q	Y	Y	H	A	A	E	T	T	I	Y	D	Y	I	A	R	R	H	P	Q	R	.	.	.	.	.	A	Q	C	V	T	D	F	M	S	T	V	M	S
Query Conservation																																																																.	.	.	.	.
Alig confidence																																.	.																															.	.	.	.	.
Template Conservation																																.	.
Template Sequence		D	G	L	T	A	A	L	L	Q	F	N	A	F	P	A	S	E	E	I	N	H	R	K	R	M	G	L	I	L	R	.	.	V	P	A	L	Q	A	Y	S	V	V	M	Y	E	G	W	R	N	V	I	A	E	Y	V	A	S	R	L	G	T	S	P	T	D	H	V	P	R	T	V	G	Y	L	L	L	G	V	A	M
Template Known Secondary structure											T	T				G	G	G														.	.	S																											T	S		T	T	S
Template Predicted Secondary structure																																.	.
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120			.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	L	S	A	K	A	R	E	G	H	S	I	E	Q	L	C	A	T	A	A	M	A	G	E	A	I	K	T	I	L	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	A	Y	E	Q	W	L	D	D	D	S	L	E	L	N	E	L	L	A	S	G	M	Q	S	L	Y	D	G	L	S	S
Template Known Secondary structure											T	T	S																	S	T	T
Template Predicted Secondary structure
Template SS confidence
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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