Job Description P39334 Confidence 99.90% Date Thu Jan 5 11:59:26 GMT 2012 Rank 16 Aligned Residues 179 % Identity 16% Template c2np5A_ PDB info PDB header:transcription Chain: A: PDB Molecule:transcriptional regulator; PDBTitle: crystal structure of a transcriptional regulator (rha1_ro04179) from2 rhodococcus sp. rha1. Resolution 1.80 Å

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		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	P	E	Q	A	I	S	A	A	K	V	L	F	H	Q	K	G	F	D	A	V	S	V	A	E	V	T	D	Y	L	G	I	N	P	P	S	L	Y	A	A	F	G	S	K	A	G	L	F	S	R	V	L	N	E	Y	V	G	T	E	A	I	P	L	A	D	I	L	R	D	D	R	P	V	G	E	C	L	V	E	V
Query Conservation
Alig confidence																																																																							.
Template Conservation																																																																							.
Template Sequence		S	P	E	R	L	A	A	A	L	F	D	V	A	A	E	S	G	L	E	G	A	S	V	R	E	V	A	K	R	A	G	V	S	I	G	A	V	Q	H	H	F	S	T	K	D	E	X	F	A	F	A	L	R	T	L	V	D	K	L	L	A	R	L	S	E	V	E	R	G	.	G	D	P	A	R	A	L	F	A	A
Template Known Secondary structure																			G	G	G											T											S	S																						T	S			T	.	T
Template Predicted Secondary structure																																																																							.
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.		.	80	.	.	.	.	.	.	.	.
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.		.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
Predicted Secondary structure																					.
Query SS confidence																					.
Query Sequence		L	K	E	A	A	R	R	Y	S	Q	N	G	G	C	A	G	C	M	V	.	L	E	G	I	H	S	H	D	P	Q	A	R	D	I	A	V	Q	Y	Y	H	A	A	E	T	T	I	Y	D	Y	I	A	R	R	H	P	Q	R	A	Q	C	V	T	D	F	M	S	T	V	M	S	G	L	S	A	K	A	R	E	G	H
Query Conservation																					.
Alig confidence																					.
Template Conservation
Template Sequence		X	S	Q	L	L	P	L	D	E	A	R	S	R	E	A	H	V	X	A	A	F	A	V	R	A	A	T	S	P	S	L	A	E	I	R	R	K	T	L	F	T	I	R	T	G	L	S	A	V	L	I	G	I	G	T	P	E	A	E	T	R	A	A	L	L	L	A	T	V	D	G	L	A	L	D	A	I	G	S	P
Template Known Secondary structure				T	T	S			S																		T	T																									T	T	T		T	T																							G
Template Predicted Secondary structure
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	I	E	Q	L	C	A	T	A	A	M	A	G	E	A	I	K	T	I	L	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	L	Y	P	P	E	Y	L	E	H	A	L	D	I	Q	I	G	X	I	L	Q
Template Known Secondary structure		G	G	S																	T	T
Template Predicted Secondary structure
Template SS confidence
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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