Job Description P39334 Confidence 73.97% Date Thu Jan 5 11:59:26 GMT 2012 Rank 256 Aligned Residues 48 % Identity 23% Template c2l4aA_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:leucine responsive regulatory protein; PDBTitle: nmr structure of the dna-binding domain of e.coli lrp Resolution UNK

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	V	T	K	K	Q	S	R	V	P	G	R	P	R	R	F	A	P	E	Q	A	I	S	A	A	K	V	L	F	H	Q	K	G	F	D	A	V	S	V	A	E	V	T	D	Y	L	G	I	N	P	P	S	L	Y	A	A
Query Conservation
Alig confidence							.	.															.	.	.	.											.	.
Template Conservation							.	.															.	.	.	.											.	.
Template Sequence		M	V	D	S	K	.	.	K	R	P	G	K	D	L	D	R	I	D	R	N	I	.	.	.	.	L	N	E	L	Q	K	D	G	R	I	.	.	S	N	V	E	L	S	K	R	V	G	L	S	P	T	P	C	L	E	R
Template Known Secondary structure							.	.		S	S	G	G	G									.	.	.	.								T	T		.	.		S						T	T	T	S
Template Predicted Secondary structure							.	.															.	.	.	.											.	.
Template SS confidence
		1	.	.	.	.			.	.	.	.	10	.	.	.	.	.	.	.	.	.					20	.	.	.	.	.	.	.	.	.			30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions