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Job DescriptionP39334
Confidence99.78%DateThu Jan 5 11:59:26 GMT 2012
Rank112Aligned Residues170
% Identity11%Templatec2iu5A_
PDB info PDB header:transcriptionChain: A: PDB Molecule:hth-type dhaklm operon transcriptional activator dhas; PDBTitle: dihydroxyacetone kinase operon activator dhas
Resolution1.6 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   17..20.........30.........40.........50.........60.........70.........80.........90......
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Query Sequence  APEQAISAAKVLFHQKGFDAVSVAEVTDYLGINPPSLYAAFGSKAGLFSRVLNEYVGTEAIPLADILRDDRPVGECLVEV
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Template Sequence  TQKIIAKAFKDLMQSNAYHQISVSDIMQTAKIRRQTFYNYFQNQEELLSWIFENDFAELINDNSDYYG. . . . . . . . WQNE
Template Known Secondary structure  S
GGG

TS
GGGGGGT
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   7..10.........20.........30.........40.........50.........60.........70.... ....
 
   97..100.........110.........120.........130.........140.........150.........160.........170. ...
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Query Sequence  LKEAARRYSQNGGCAGCMVLEGIHSHDPQARDIAVQYYHAAETTIYDYIARRHPQRAQCVTDFMSTVMSGLSAKA. . REG
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Template Sequence  LLLLLRYLDENQIFYQKIFVIDKNFEHFFLIQWENLLDKVIFDQEKKSDYHWSDLEKSFICRYNAAAICAITRESIIRGN
Template Known Secondary structure  T
TTS




T
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   7980.........90.........100.........110.........120.........130.........140.........150........
 
   175....180.........190....
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Query Sequence  HSIEQLCATAAMAGEAIKTI
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Template Sequence  SLEKLYSQIVNLLLAQIKIF
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SGGGTT
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   159160.........170........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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