Job Description P39334 Confidence 99.91% Date Thu Jan 5 11:59:26 GMT 2012 Rank 12 Aligned Residues 179 % Identity 11% Template c2hyjA_ PDB info PDB header:transcription Chain: A: PDB Molecule:putative tetr-family transcriptional regulator; PDBTitle: the crystal structure of a tetr-family transcriptional regulator from2 streptomyces coelicolor Resolution 2.19 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	R	R	F	A	P	E	Q	A	I	S	A	A	K	V	L	F	H	Q	K	G	F	D	A	V	S	V	A	E	V	T	D	Y	L	G	I	N	P	P	S	L	Y	A	A	F	G	S	K	A	G	L	F	S	R	V	L	N	E	Y	V	G	T	E	A	I	P	L	A	D	I	L	R	D	D	R	P	V	G	E	C
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	A	Q	A	T	R	G	R	I	L	G	R	A	A	E	I	A	S	E	E	G	L	D	G	I	T	I	G	R	L	A	E	E	L	E	M	S	K	S	G	V	H	K	H	F	G	T	K	E	T	L	Q	I	S	T	L	D	K	A	F	V	D	F	W	H	R	V	V	E	P	A	L	A	E	P	P	G	L	R	R
Template Known Secondary structure		T																					G	G	G											T								T	T		S	S																					T	G	G	G	G	G	S		T	T
Template Predicted Secondary structure
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110				.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.								.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure																				.	.	.																																							.	.	.	.	.	.	.
Query SS confidence																				.	.	.																																							.	.	.	.	.	.	.
Query Sequence		L	V	E	V	L	K	E	A	A	R	R	Y	S	Q	N	G	G	C	.	.	.	A	G	C	M	V	L	E	G	I	H	S	H	D	P	Q	A	R	D	I	A	V	Q	Y	Y	H	A	A	E	T	T	I	Y	D	Y	I	A	R	R	.	.	.	.	.	.	.	H	P	Q	R	A	Q	C	V	T	D	F	M	S	T
Query Conservation																				.	.	.																																							.	.	.	.	.	.	.
Alig confidence																				.	.	.																																							.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	R	A	V	C	A	N	S	V	G	Y	L	E	E	P	L	L	P	G	G	C	L	L	T	A	A	L	S	E	Y	D	G	R	P	G	R	V	R	D	A	V	A	E	V	W	S	R	W	R	E	Q	L	R	A	D	L	T	A	A	V	D	K	G	E	L	P	A	G	F	D	V	E	Q	A	L	F	E	I	V	A
Template Known Secondary structure															S		S	S	T	T	S											T	T	S	T	T																											T	T	S	S		T	T
Template Predicted Secondary structure
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	M	S	G	L	S	A	K	A	R	E	G	H	S	I	E	Q	L	C	A	T	A	A	M	A	G	E	A	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	G	L	A	L	N	A	A	M	Q	L	Q	H	D	R	T	A	A	D	R	A	R	R	A	I	E	R	A	L
Template Known Secondary structure																T	T
Template Predicted Secondary structure
Template SS confidence
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions