Job Description P39334 Confidence 99.88% Date Thu Jan 5 11:59:26 GMT 2012 Rank 39 Aligned Residues 157 % Identity 17% Template c2hkuB_ PDB info PDB header:transcription regulator Chain: B: PDB Molecule:a putative transcriptional regulator; PDBTitle: structural genomics, the crystal structure of a putative2 transcriptional regulator from rhodococcus sp. rha1 Resolution 2.00 Å

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		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	P	E	Q	A	I	S	A	A	K	V	L	F	H	Q	K	G	F	D	A	V	S	V	A	E	V	T	D	Y	L	G	I	N	P	P	S	L	Y	A	A	F	G	S	K	A	G	L	F	S	R	V	L	N	E	Y	V	G	T	E	A	I	P	L	A	D	I	L	R	D	D	R	P	V	G	E	C	L	V	E	V
Query Conservation
Alig confidence																				.
Template Conservation																				.
Template Sequence		T	R	D	A	L	F	T	A	A	T	E	L	F	L	E	H	G	E	.	G	V	P	I	T	Q	I	C	A	A	A	G	A	H	P	N	Q	V	T	Y	Y	Y	G	S	K	E	R	L	F	V	E	V	A	C	A	A	V	L	R	A	G	K	R	A	E	D	D	A	A	T	A	E	T	V	G	D	Y	T	E	K	L
Template Known Secondary structure																			T	.	T	S									T	T			T								S	S																									T	T		S	B
Template Predicted Secondary structure																				.
Template SS confidence
		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.		.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.			.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.				.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
Predicted Secondary structure																								.	.																																		.	.	.
Query SS confidence																								.	.																																		.	.	.
Query Sequence		L	K	E	A	A	R	R	Y	S	Q	N	G	G	C	A	G	C	M	V	L	E	G	.	.	I	H	S	H	D	P	Q	A	R	D	I	A	V	Q	Y	Y	H	A	A	E	T	T	I	Y	D	Y	I	A	R	R	H	P	Q	.	.	.	R	A	Q	C	V	T	D	F	M	S	T	V	M	S	G	L	S	A	K	A
Query Conservation																								.	.																																		.	.	.
Alig confidence																								.	.																																		.	.	.
Template Conservation
Template Sequence		V	G	S	L	L	G	P	G	A	P	S	V	E	L	F	T	S	A	X	L	X	T	G	R	R	S	E	L	R	D	L	I	T	D	T	L	R	T	L	H	S	S	G	E	V	A	L	I	R	T	L	X	R	T	G	W	Q	L	R	A	G	I	D	V	E	S	K	A	F	W	S	A	I	F	G	L	V	I	Q	K
Template Known Secondary structure							T	T	T															T	T																												G	G	G	T				S	S
Template Predicted Secondary structure
Template SS confidence
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
		172	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	E	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	A	S
Template Known Secondary structure		T
Template Predicted Secondary structure
Template SS confidence
		178	.	180

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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