Job Description P39334 Confidence 53.45% Date Thu Jan 5 11:59:26 GMT 2012 Rank 370 Aligned Residues 56 % Identity 13% Template c2dmqA_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:lim/homeobox protein lhx9; PDBTitle: solution structure of the homeobox domain of lim/homeobox2 protein lhx9 Resolution UNK

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60
Predicted Secondary structure																			.
Query SS confidence																			.
Query Sequence		T	K	K	Q	S	R	V	P	G	R	P	R	R	F	A	P	E	.	Q	A	I	S	A	A	K	V	L	F	H	Q	K	G	F	D	A	V	S	V	A	E	V	T	D	Y	L	G	I	N	P	P	S	L	Y	A	A	F	G	S	K
Query Conservation																			.
Alig confidence																			.										.	.
Template Conservation																													.	.
Template Sequence		S	S	G	S	S	G	K	R	M	R	T	S	F	K	H	H	Q	L	R	T	M	K	S	Y	F	A	I	.	.	N	H	N	P	D	A	K	D	L	K	Q	L	A	Q	K	T	G	L	T	K	R	V	L	Q	V	W	F	Q	N	A
Template Known Secondary structure																													.	.		S	S													T
Template Predicted Secondary structure																													.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.			.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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