Job Description P39334 Confidence 99.85% Date Thu Jan 5 11:59:26 GMT 2012 Rank 71 Aligned Residues 172 % Identity 15% Template c1zk8A_ PDB info PDB header:transcription regulator Chain: A: PDB Molecule:transcriptional regulator, tetr family; PDBTitle: crystal structure of transcriptional regulator from bacillus cereus2 atcc 14579 Resolution 2.15 Å

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		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	P	E	Q	A	I	S	A	A	K	V	L	F	H	Q	K	G	F	D	A	V	S	V	A	E	V	T	D	Y	L	G	I	N	P	P	S	L	Y	A	A	F	G	S	K	A	G	L	F	S	R	V	L	N	E	Y	V	G	T	E	A	I	P	L	A	D	I	L	R	D	D	R	P	V	G	E	C	L	V	E	V
Query Conservation
Alig confidence																																																																			.
Template Conservation																																																																			.
Template Sequence		T	L	Q	K	I	V	E	T	A	A	E	I	A	D	A	N	G	V	Q	E	V	T	L	A	S	L	A	Q	T	L	G	V	R	S	P	S	L	Y	N	H	V	K	G	L	Q	D	V	R	K	N	L	G	I	Y	G	I	K	K	L	H	N	R	L	E	E	.	A	A	E	D	K	R	X	D	E	A	I	H	A	L
Template Known Secondary structure																			G	G	G											T	S						T	T	T		S	S																							.			T	T
Template Predicted Secondary structure																																																																			.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.		.	.	.	.	.	.	80	.	.	.	.	.	.	.
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
Predicted Secondary structure																																																																																.	.
Query SS confidence																																																																																.	.
Query Sequence		L	K	E	A	A	R	R	Y	S	Q	N	G	G	C	A	G	C	M	V	L	E	G	I	H	S	H	D	P	Q	A	R	D	I	A	V	Q	Y	Y	H	A	A	E	T	T	I	Y	D	Y	I	A	R	R	H	P	Q	R	A	Q	C	V	T	D	F	M	S	T	V	M	S	G	L	S	A	K	A	R	E	G	.	.
Query Conservation																																																																																.	.
Alig confidence																				.	.	.	.	.																										.	.																													.	.
Template Conservation																				.	.	.	.	.																										.	.
Template Sequence		G	E	A	Y	V	A	F	V	R	K	H	P	G	L	Y	E	A	T	.	.	.	.	.	F	L	R	D	E	E	V	R	K	A	G	D	G	I	V	K	L	C	L	Q	V	L	Q	Q	Y	.	.	G	L	E	G	E	N	A	L	H	A	T	R	G	F	R	S	I	C	H	G	F	A	S	I	E	Q	Q	G	G	F
Template Known Secondary structure																			T	.	.	.	.	.	T																						G	G	G	.	.	T																											T
Template Predicted Secondary structure																				.	.	.	.	.																										.	.
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.						.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130			.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	S	I	E	Q	L	C	A	T	A	A	M	A	G	E	A	I	K	T	I	L	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	L	P	L	D	L	D	I	S	L	H	V	L	L	E	T	F	I	K	G	L	R
Template Known Secondary structure			S	S	S
Template Predicted Secondary structure
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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