Return to main results Retrieve Phyre Job Id

Job DescriptionP39334
Confidence99.74%DateThu Jan 5 11:59:26 GMT 2012
Rank119Aligned Residues96
% Identity17%Templatec1z0xA_
PDB info PDB header:transcriptionChain: A: PDB Molecule:transcriptional regulator, tetr family; PDBTitle: crystal structure of transcriptional regulator, tetr family from2 enterococcus faecalis v583
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   15....20.........30. ........40.........50.........60.........70.........80.........90...
Predicted Secondary structure 


.















Query SS confidence 
















.





























































Query Sequence  RFAPEQAISAAKVLFHQ. KGFDAVSVAEVTDYLGINPPSLYAAFGSKAGLFSRVLNEYVGTEAIPLADILRDDRPVGECL
Query Conservation     
  

 

  

  . 
    
   

  



   

  
 

  
    
                        
Alig confidence 
















.











































.....












Template Conservation   


  

 

  

    
    
   

  



  


 

 


 
  

        .....            
Template Sequence  KLSKDTIIAAAFSLLEKSPTLEQLSXRKVAKQLGVQAPAIYWYFKNKQALLQSXAEAIEEHF. . . . . QEPALCGEWYSDL
Template Known Secondary structure 

SS

GGG

TS
TT
SST
.....





S
Template Predicted Secondary structure 












.....







Template SS confidence 















































































   4.....10.........20.........30.........40.........50.........60..... ....70........
 
   94.....100.........110.....
Predicted Secondary structure 


Query SS confidence 





















Query Sequence  VEVLKEAARRYSQNGGCAGCMV
Query Conservation                        
Alig confidence 





















Template Conservation                
       
Template Sequence  LAFXENYYDLYQQFPCAVAIEI
Template Known Secondary structure  STT
Template Predicted Secondary structure 


Template SS confidence 





















   7980.........90.........100
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions