Job Description P39334 Confidence 99.87% Date Thu Jan 5 11:59:26 GMT 2012 Rank 55 Aligned Residues 180 % Identity 12% Template c1u9nA_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:transcriptional repressor ethr; PDBTitle: crystal structure of the transcriptional regulator ethr in2 a ligand bound conformation opens therapeutic perspectives3 against tuberculosis and leprosy Resolution 2.30 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.			.	.	.	90	.
Predicted Secondary structure																																																																											.	.
Query SS confidence																																																																											.	.
Query Sequence		R	R	F	A	P	E	Q	A	I	S	A	A	K	V	L	F	H	Q	K	G	F	D	A	V	S	V	A	E	V	T	D	Y	L	G	I	N	P	P	S	L	Y	A	A	F	G	S	K	A	G	L	F	S	R	V	L	N	E	Y	V	G	T	E	A	I	P	L	A	D	I	L	R	D	D	.	.	R	P	V	G	E
Query Conservation																																																																											.	.
Alig confidence																																																																											.	.
Template Conservation
Template Sequence		G	D	D	R	E	L	A	I	L	A	T	A	E	N	L	L	E	D	R	P	L	A	D	I	S	V	D	D	L	A	K	G	A	G	I	S	R	P	T	F	Y	F	Y	F	P	S	K	E	A	V	L	L	T	L	L	D	R	V	V	N	Q	A	D	X	A	L	Q	T	L	A	E	N	P	A	D	T	D	R	E	N
Template Known Secondary structure																	T	T	T	S		G	G	G											T	S						T	T	T		S																											S			S	S
Template Predicted Secondary structure
Template SS confidence
		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.								.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure																																																											.	.	.	.	.	.	.
Query SS confidence																																																											.	.	.	.	.	.	.
Query Sequence		C	L	V	E	V	L	K	E	A	A	R	R	Y	S	Q	N	G	G	C	A	G	C	M	V	L	E	G	I	H	S	H	D	P	Q	A	R	D	I	A	V	Q	Y	Y	H	A	A	E	T	T	I	Y	D	Y	I	A	R	R	.	.	.	.	.	.	.	H	P	Q	R	A	Q	C	V	T	D	F	M	S	T	V	M
Query Conservation																																																											.	.	.	.	.	.	.
Alig confidence																												.	.																														.	.	.	.	.	.	.
Template Conservation																												.	.
Template Sequence		X	W	R	T	G	I	N	V	F	F	E	T	F	G	S	H	K	A	V	T	R	A	G	Q	A	A	.	.	R	A	T	S	V	E	V	A	E	L	W	S	T	F	X	Q	K	W	I	A	Y	T	A	A	V	I	D	A	E	R	D	R	G	A	A	P	R	T	L	P	A	H	E	L	A	T	A	L	N	L	X	N
Template Known Secondary structure																T												.	.	T	T	T																													T	T	S	S				S
Template Predicted Secondary structure																												.	.
Template SS confidence
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.			.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
		165	.	.	.	.	170	.	.	.	.	.	.	.	.		.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
Predicted Secondary structure																.
Query SS confidence																.
Query Sequence		S	G	L	S	A	K	A	R	E	G	H	S	I	E	.	Q	L	C	A	T	A	A	M	A	G	E	A	I	K	T	I	L
Query Conservation																.
Alig confidence																.
Template Conservation
Template Sequence		E	R	T	L	F	A	S	F	A	G	E	Q	P	S	V	P	E	A	R	V	L	D	T	L	V	H	I	W	V	T	S	I
Template Known Secondary structure											T		S	S
Template Predicted Secondary structure
Template SS confidence
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions