Job Description Q46809 Confidence 97.99% Date Thu Jan 5 12:34:36 GMT 2012 Rank 22 Aligned Residues 140 % Identity 21% Template c3md0A_ PDB info PDB header:transport protein Chain: A: PDB Molecule:arginine/ornithine transport system atpase; PDBTitle: crystal structure of arginine/ornithine transport system2 atpase from mycobacterium tuberculosis bound to gdp (a ras-3 like gtpase superfamily protein) Resolution 2.45 Å

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		17	.	.	20	.	.	.	.	.	.	.			.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
Predicted Secondary structure													.	.
Query SS confidence													.	.
Query Sequence		Q	K	R	P	T	V	I	S	V	V	G	.	.	A	G	G	K	T	S	L	L	F	W	L	A	E	L	L	Q	A	S	G	R	R	V	L	I	T	T	T	T	H	M	F	M	P	T	S	H	W	P	V	V	F	C	R	D	P	A	M	L	P	H	A	S	L	T	S	P	I	S	F	C	F	H	S	W	K	A	N
Query Conservation													.	.
Alig confidence													.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.
Template Conservation																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.
Template Sequence		S	G	N	A	H	R	V	G	I	T	G	V	P	G	V	G	K	S	T	A	I	E	A	L	G	M	H	L	I	E	R	G	H	R	V	A	V	L	A	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	M	A	R	L	A	V	H	P	N	A	Y	I	R	P	S	.	.	.
Template Known Secondary structure					S									T	T	S	S														T	T	T									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							T	S	T	T							.	.	.
Template Predicted Secondary structure																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.
Template SS confidence
		55	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.																						.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
		95	.	.	.	.	100	.	.	.	.	.	.	.	.			.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
Predicted Secondary structure																.	.
Query SS confidence																.	.
Query Sequence		Q	G	K	V	Q	G	F	T	P	E	A	I	D	A	.	.	L	V	Q	R	P	E	C	D	V	I	L	I	E	A	D	G	S	R	G	M	P	L	K	A	P	D	E	H	E	P	C	I	P	K	S	S	C	C	V	I	A	V	M	G	G	H	T	L	G	A	K	V	S	T	E	N	V	H	R	W	S	Q	F	A
Query Conservation																.	.
Alig confidence		.	.													.	.																		.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.																																.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	T	L	G	G	V	T	R	A	T	R	E	T	V	V	L	L	E	A	A	G	F	D	V	I	L	I	E	T	G	Q	S	.	.	.	.	.	.	.	.	.	.	.	E	V	A	V	A	N	M	V	D	T	F	V	L	L	T	L	A	R	T	G	D	Q	L	Q	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		.	.																			T	T												.	.	.	.	.	.	.	.	.	.	.						T	T		S								S		T	T	T	T	T	T	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.																																.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
				131	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.												.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
Predicted Secondary structure
Query SS confidence
Query Sequence		D	I	T	G	L	T	P	D	A	T	L	Q	L	S	D	L	V	A	L	V	R	H	P	Q	G	A	F	K	N	V	P	Q	G	C	R	R	V	W	F	I	N	R	F	S	Q	C	E	N	A	I	A	Q	S	E	L	L	Q	P
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	I	K	K	G	V	L	E	L	A	D	I	V	V	V	N	K	A	D	G	E	H	H	K	E	A	R	L	A	A	R	E	L
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T			T	T	G	G	G	G		S									G	G	G
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																											189	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions