22 c3md0A_ Probab=97.99   E-value=0.00018  Score=48.68  Aligned_columns=140  Identities=21%

Q ss_pred             CCCCCEEEEEC--CCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHCCCCCCCCCHHHHHHHCCCCCEEEEEEECC
Q ss_conf             37885899986--9846899999999999769829998303367998111110013510687774102782899974167
Q batch____        17 QKRPTVISVVG--AGGKTSLLFWLAELLQASGRRVLITTTTHMFMPTSHWPVVFCRDPAMLPHASLTSPISFCFHSWKAN   94 (256)
Q Consensus        17 ~k~~~VIsivG--aGGKTTli~~LA~e~~~~G~~VlvTTTT~i~~p~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~   94 (256)
                      ..+..+|+|+|  +.|||||+.+|..+....|.++.+|+.                     .........+..+...   
T Consensus        46 ~~~~~~Iai~G~pnaGKSSLln~L~~~~~~~~~~~~~t~~---------------------~~~~~~~~~~~~v~~~---  101 (301)
T c3md0A_          46 SGNAHRVGITGVPGVGKSTAIEALGMHLIERGHRVAVLAV---------------------RMARLAVHPNAYIRPS---  101 (301)
T ss_dssp             CCCSEEEEEECCTTSSHHHHHHHHHHHHHTTTCCEEEEEC---------------------CCHHHHTSTTEEEECC---
T ss_pred             CCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCEEEE---------------------CCEEEEEECCEEEEEE---
T ss_conf             2897289997389887889999999876414576751677---------------------1001360398789996---


Q ss_pred             CCCCCCCCHHHHHH--HHHCCCCCEEEEECCCCCCCEEECCCCCCCCCCCCCCEEEEEECCHHCCCCCCHHHCCCHHHHH
Q ss_conf             88451478999999--9825799799995758988643435235980178888799970633508524822123899999
Q batch____        95 QGKVQGFTPEAIDA--LVQRPECDVILIEADGSRGMPLKAPDEHEPCIPKSSCCVIAVMGGHTLGAKVSTENVHRWSQFA  172 (256)
Q Consensus        95 ~gKl~gl~~~~~~~--l~~~~~~D~iLIEADGak~~plKap~~~EPvIp~~t~~VI~V~g~~~lG~pi~~e~~hR~e~~~  172 (256)
                        -+.|+.....+.  +.+..++|++++|+.++           .-.+....|.++.|++........            
T Consensus       102 --dt~G~~~~~~~~~~~~d~~~~d~~~~e~~~~-----------~~~~~~~~d~~~~v~d~~~~~~~~------------  156 (301)
T c3md0A_         102 --TLGGVTRATRETVVLLEAAGFDVILIETGQS-----------EVAVANMVDTFVLLTLARTGDQLQ------------  156 (301)
T ss_dssp             --CHHHHHHHHHHHHHHHHHTTCCEEEEECCCH-----------HHHHHTTCSEEEEEEESCTTTTTT------------
T ss_pred             --ECCCCCCHHHHHHHHHHHCCCCHHHHHHHHH-----------HHHHHHCCCEEEEEECCCCCHHHH------------
T ss_conf             --0234110036789996423865214543689-----------999861388557962557852678------------


Q ss_pred             HHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHH
Q ss_conf             9856886652489999998506532013677785189997214888889999999999
Q batch____       173 DITGLTPDATLQLSDLVALVRHPQGAFKNVPQGCRRVWFINRFSQCENAIAQSELLQP  230 (256)
Q Consensus       173 ~i~~~~~~~~it~~~ia~ll~~~~G~~K~~~~~~~~i~~lNk~D~~~~~~~a~~ia~~  230 (256)
                                               .++...-....++++||+|.......-..+...
T Consensus       157 -------------------------~~~~~~~~~~~i~viNK~D~~~~~~~~~~~~~~  189 (301)
T c3md0A_         157 -------------------------GIKKGVLELADIVVVNKADGEHHKEARLAAREL  189 (301)
T ss_dssp             -------------------------TCCTTGGGGCSEEEEECCCGGGHHHHHHHHHHH
T ss_pred             -------------------------HHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHH
T ss_conf             -------------------------754432367708985154678800132589999