 |
Job Description | P26458 | Confidence | 4.03% | Date | Thu Jan 5 11:42:54 GMT 2012 |
Rank | 39 | Aligned Residues | 72 |
% Identity | 13% | Template | d3cx5c1 |
SCOP info | a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
| a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
| a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
|
Resolution | 1.90 |
|
 |
  |   |
107 | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | |
. | . |
Predicted Secondary structure |   |
 |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
Query Sequence |   |
R | G | K | I | A | D | A | R | W | R | K | M | W | D | A | G | L | V | I | G | S | L | V | P | P | V | V | F | G | I | A | F | G | N | L | L | L | G | V | P | F | A | F | T | P | Q | L | R | V | E | Y | L | G | S | F | W | Q | L | L | T | P | F | P | L | L | C | G | L | L | S | L | G | M | V | I | L | Q | . |
G | G |
Query Conservation |   |
|   |
|   |   |   |   |   |   |
|   |   |
|
|   |   |
|   |
|
|
|   |
|   |   |   |   |   |
|
|   |
|
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |
|   |
|
|   |
|
|   |
|   |   |   |
|   |   |   |   |   |   | . |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
Template Conservation |   |
  |   |   |   |
|
|   |   |   |
|
|   |   |   |   |   |
|   |   | . | . | . | . | . | . |   |
|   |   |
|
|   |
|
|
|
|
|   |   |
|   |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |
|   |   |   |   |
|
|
|   |
|   |   |
|
|   |   |
|
|
|   |
Template Sequence |   |
R | S | V | V | R | G | N | T | F | K | V | L | S | K | F | F | F | F | I | . |
. |
. |
. |
. |
. |
F | V | F | N | F | V | L | L | G | Q | I | G | A | C | H | V | E | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
V | P | Y | V | L | M | G | Q | I | A | T | F | I | Y | F | A | Y | F | L | I | I |
Template Known Secondary structure |   |
|
| S | S | S | S | S | T | T |
|  |  |  |  |  |  |  |  |  | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  | T | S |
| S |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | T | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | |
|
|
|
|
|
. | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . |
  |
  |   |
186 | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | W | L | Q | L | K | T | V | G | V | I | H | L | R | S | Q |
Query Conservation |   |
  |   |
|   |   |
|
|   |
|   |
|   |   |
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|   |   |   |   |
|   |   |
|   |   |   |   |   |
Template Sequence |   |
V | P | V | I | S | T | I | E | N | V | L | F | Y | I | G | R |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
367 | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|