Return to main results Retrieve Phyre Job Id

Job DescriptionQ2MB16
Confidence5.02%DateThu Jan 5 12:34:03 GMT 2012
Rank36Aligned Residues22
% Identity36%Templatec1bhbA_
PDB info PDB header:photoreceptorChain: A: PDB Molecule:bacteriorhodopsin; PDBTitle: three-dimensional structure of (1-71) bacterioopsin2 solubilized in methanol-chloroform and sds micelles3 determined by 15n-1h heteronuclear nmr spectroscopy
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.. .......20.....
Predicted Secondary structure  ..


Query SS confidence 









. .












Query Sequence  FIIRTVMLIA. . LVWIGLLLSGYGV
Query Conservation 

 

 


 ..

 
 






 
Alig confidence 









..







.



Template Conservation 
  
  
 



  



 
.
 
 
Template Sequence  YAITTLVPAIAFTMYLSMLL. GYGL
Template Known Secondary structure  S.TS
Template Predicted Secondary structure  .
Template SS confidence 
























   43......50.........60.. ....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions