Job Description P28247 Confidence 13.42% Date Thu Jan 5 11:44:32 GMT 2012 Rank 12 Aligned Residues 42 % Identity 19% Template c3h7hA_ PDB info PDB header:transcription Chain: A: PDB Molecule:transcription elongation factor spt4; PDBTitle: crystal structure of the human transcription elongation factor dsif,2 hspt4/hspt5 (176-273) Resolution 1.55 Å

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		122	.	.	.	.	.	.	.	130	.			.	.	.	.	.	.	.	.	140							.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure												.	.										.	.	.	.	.	.
Query SS confidence												.	.										.	.	.	.	.	.
Query Sequence		K	F	I	K	S	H	V	C	D	F	.	.	A	C	K	N	G	G	R	A	L	.	.	.	.	.	.	T	R	K	S	E	L	L	S	A	Q	Y	S	G	L	I	T	S	L	K	G	K	R	S
Query Conservation												.	.										.	.	.	.	.	.
Alig confidence												.	.										.	.	.	.	.	.
Template Conservation
Template Sequence		S	L	V	K	T	I	D	Q	F	E	Y	D	G	C	D	N	C	D	A	Y	L	Q	M	K	G	N	R	E	M	V	Y	D	C	T	S	S	S	F	D	G	I	I	A	M	M	S	P	E	D	S
Template Known Secondary structure			B													T	T	T							T	T											S									S		G	G	G
Template Predicted Secondary structure
Template SS confidence
		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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